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EMBL-PKU / BASALT

MIT License
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Bug shows "FileNotFoundError: [Errno 2] No such file or directory: 'BestBinset_outlier_refined_filtrated_retrieved_checkm/storage/'" #39

Open 1023011930 opened 5 months ago

1023011930 commented 5 months ago

Basalt_log.txt nohup.txt 7_BASALT.txt image

EMBL-PKU commented 5 months ago

Could you please check is there any bin present under the folder of 'BestBbinset_outlier_refined_filtrated'?

1023011930 commented 5 months ago

Sure，I have checked it. And here is my result! cd BestBinset_outlier_refined_filtrated 微信截图_20240609100157

1023011930 commented 5 months ago

It looks like the previous bin was unable to get into the "BestBinset_outlier_refined_filtrated_retrieved" folder, causing the next checkm to report the error "ERROR: No Check the extension (-x) used to identify bins. " which eventually caused the programme to stop

EMBL-PKU commented 5 months ago

Thank you. It looks like there was no bin containing in retrieval binset folder. I will correct the error in the following a couple of days. Thank you for finding this error!

1023011930 commented 5 months ago

Dear Mr Yu, thank you for your work and I hope your research gets better and better!

RekValT commented 4 months ago

I'm running into the same issue, is there any workaround? Thank you.

yinyueling commented 3 months ago

Yes,I also meet the same issue with running BASILT.sif from 微云. ![Uploading 截屏2024-07-31 16.01.02.png…]()