Open tenguzame opened 4 months ago
Good morning, I'm trying to run BASALT on a local HPC. I'm trying to bin 2 assemblies using 2 read sets, using the following command:
srun BASALT.py -a MHallok.fasta -s CC_TOT_03_trim_norm_1.fastq,CC_TOT_03_trim_norm_2.fastq -t 30 -e m -m 350 --mode new
Everything runs fine, until CONCOCT is run. At that point, the program halts with the following error:
FileNotFoundError: [Errno 2] No such file or directory: 'clustering_gt1000.csv'
How do I fix it?
Best regards
Good morning, I'm trying to run BASALT on a local HPC. I'm trying to bin 2 assemblies using 2 read sets, using the following command:
srun BASALT.py -a MHallok.fasta -s CC_TOT_03_trim_norm_1.fastq,CC_TOT_03_trim_norm_2.fastq -t 30 -e m -m 350 --mode newEverything runs fine, until CONCOCT is run. At that point, the program halts with the following error:
FileNotFoundError: [Errno 2] No such file or directory: 'clustering_gt1000.csv'How do I fix it?
Best regards