Closed shinlin77 closed 2 years ago
I've isolated the point where caper fails, and it seems MACS2 is complaining about entries that look like
. -1 -1 N 1000 .
in the following file
/atac-seq-pipeline/atac/d05c221a-c12f-444d-89b8-20577d8c4f3c/call-call_peak/shard-5/attempt-2/inputs/868069139/sample_sorted.tagAlign.gz
Do you have some idea of how these types of lines could have been generated?
I've isolated the point where caper fails, and it seems MACS2 is complaining about entries that look like
. -1 -1 N 1000 .
in the following file
/atac-seq-pipeline/atac/d05c221a-c12f-444d-89b8-20577d8c4f3c/call-call_peak/shard-5/attempt-2/inputs/868069139/sample_sorted.tagAlign.gz
Do you have some idea of how these types of lines could have been generated?