search

ENCODE-DCC / chip-seq-pipeline2

ENCODE ChIP-seq pipeline
MIT License
234 stars 123 forks source link

parrallel proccessing with spp #268

Closed louisgevirtzman closed 2 years ago

louisgevirtzman commented 2 years ago

I am confused with this line of code from encode_task_spp.py nth_param = '-p={}'.format(nth) if nth < 2 else '' should it be: nth_param = '-p={}'.format(nth) if nth >= 2 else '' when I run the pipeline with spp it does not seem to use multiple threads

leepc12 commented 2 years ago

Thanks for reporting. This will be fixed in the next release.

leepc12 commented 2 years ago

Fixed in v2.1.5