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ENCODE-DCC / croo

Cromwell output organizer
MIT License
13 stars 3 forks source link

feat: Allow to use CromwellMetadata with subworkflow input #6

Closed guma44 closed 4 years ago

guma44 commented 4 years ago

This pull request changes the CromwellMetadata class in the way it allows to be used with metadata that comes form the sub-workflow. Such a file would not have a 'submittedFiles' key because it is governed by the root workflow.

Purpose: It allows the Croo package to be used within a workflow itself ie. root workflow calls subworkflow that does the job and next sub-workflow will organise files from the previous one as a last step without manual intervention from the user.

leepc12 commented 4 years ago

Thanks for your PR. It's merged.

guma44 commented 4 years ago

You are welcome.