ENHANCE-PET / MOOSE

MOOSE (Multi-organ objective segmentation) a data-centric AI solution that generates multilabel organ segmentations to facilitate systemic TB whole-person research.The pipeline is based on nn-UNet and has the capability to segment 120 unique tissue classes from a whole-body 18F-FDG PET/CT image.
https://enhance.pet
GNU General Public License v3.0
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Feat: Enable MOOSE to extract HU units from CT (if provided) #13

Closed LalithShiyam closed 2 years ago

LalithShiyam commented 2 years ago

HU units of the CT can also serve as a biomarker. Therefore, it would make sense to extract the HU units - if the CT scans are provided. Include them in the separate ct-hu-values.csv file. All the stats files should go to a separate folder called 'stats'.