Updated preclinical MR model - Githubissues

ENHANCE-PET / MOOSE

MOOSE (Multi-organ objective segmentation) a data-centric AI solution that generates multilabel organ segmentations to facilitate systemic TB whole-person research.The pipeline is based on nn-UNet and has the capability to segment 120 unique tissue classes from a whole-body 18F-FDG PET/CT image.

https://enhance.pet

GNU General Public License v3.0

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Updated preclinical MR model #90

Closed mprires closed 11 months ago

mprires commented 11 months ago

Pull Request

Description:

Changed the old preclinical model with a new one

Changes Made:

Changed spacing to native voxel size on training data
Changed label mapping for this model as new tissues were added

Related Issues:

Minimoose model was not functioning as expected

Testing Done:

Did testing for on the three cases not used in training

Untitled

Reviewer Checklist:

[ ] Code is clean and follows the team's coding standards.
[ ] Tests have been added or updated to cover the changes.
[ ] Documentation has been updated or added if necessary.
[ ] The code builds and runs without errors.
[ ] The changes have been tested on relevant environments or browsers.
[ ] Any relevant dependencies have been updated.
[ ] The changes have been reviewed for security implications.