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EPFL-LCSB
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pytfa
A Python 3 implementation of Thermodynamics-based Flux Analysis
https://lcsb.epfl.ch/
Apache License 2.0
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AttributeError in build_thermo_from_equilibrator: 'str' object has no attribute 'atom_bag'
#57
wtscott31
opened
2 weeks ago
0
equilibrator-cache replaced quilt with zenodo
#56
chrismgowen
opened
1 year ago
0
Problem with building Docker container
#55
RieCo432
closed
1 year ago
1
Comma missing in constraint definition
#54
bharathn1990
opened
2 years ago
0
Problem with installation
#53
norle
opened
2 years ago
2
Dev
#52
psalvy
closed
3 years ago
1
KeyError on .convert()
#51
mdziurzynski
opened
3 years ago
2
ENH: allow different annotation keys
#50
carrascomj
opened
3 years ago
0
optlang GLPK interface does not handle tolerance anymore
#49
psalvy
closed
3 years ago
0
Solution for pytfa.relax_dgo (sympy)
#48
embt
closed
3 years ago
0
Problem with pytfa.relax_dgo due to sympy
#47
embt
opened
3 years ago
2
this is a joke
#46
12rambau
closed
2 years ago
0
Relaxation of log concentration error
#45
svevol
opened
3 years ago
1
Use displacement or not?
#44
sulheim
closed
4 years ago
1
Get new delta G values after adding metabolomics data
#43
sulheim
closed
4 years ago
1
Allow saving of imported mat files as json
#42
Wealing
closed
4 years ago
6
Name correction
#41
Wealing
closed
4 years ago
1
tutorial_basic.py ERROR - Relaxation could not complete (no DeltaG relaxation found)
#40
mretier
closed
4 years ago
7
tutorial_basics lots of warnings when mytfa.prepare()
#39
mretier
closed
4 years ago
2
Feat equilibrator thermodata
#38
carrascomj
closed
4 years ago
17
FIX: two issues in chebyshev script were fixed
#37
OmidOftadeh
closed
4 years ago
1
Integration with eQuilibrator
#36
carrascomj
opened
4 years ago
8
Fixing a couple of minor bugs and added new variable class
#35
remidhum
closed
4 years ago
5
VER: release v0.9.1
#34
realLCSB
closed
5 years ago
0
FIX: elif issubclass(elements[0], GenericClass):
#33
OmidOftadeh
closed
5 years ago
0
FIX: from warnings import warn
#32
OmidOftadeh
closed
5 years ago
1
FIX: In dict serialization, dynamic variable and constraint update
#31
weilandtd
closed
5 years ago
0
deltaGerr automatically sets to 2.0 after loading thermo model
#30
remidhum
closed
5 years ago
2
Dev: Incremental update
#29
psalvy
closed
5 years ago
1
KeyError and potential solution in sampling tutorial
#28
adamkova
closed
5 years ago
4
Dev: Hotfix v 0.9.0-b1
#27
realLCSB
closed
5 years ago
1
VER: 0.9 - RedGEM is Here!
#26
realLCSB
closed
5 years ago
1
FIX: Init HRSampler in GeneralizedHRSampler
#25
remidhum
closed
5 years ago
1
BUMP to v0.8.1
#24
psalvy
closed
5 years ago
0
Dev
#23
psalvy
closed
5 years ago
1
Adding solver setup documentation
#22
psalvy
closed
5 years ago
1
DOC: Adding links to our paper
#21
psalvy
closed
5 years ago
0
solution.f is deprecated
#20
psalvy
closed
5 years ago
1
Dev
#19
psalvy
closed
5 years ago
1
FIX: Catch None type in formulas
#18
weilandtd
closed
6 years ago
1
VER: BUMP 0.7.1-b2 after @weilandtd fix
#17
psalvy
closed
6 years ago
0
FIX: robustness for emty fields in matlab models
#16
weilandtd
closed
6 years ago
2
Polishing
#15
psalvy
closed
6 years ago
3
Dev
#14
psalvy
closed
6 years ago
1
VER: Bump to 0.7.0-b2
#13
psalvy
closed
6 years ago
1
BUMP: ver. 0.7.0-b1
#12
psalvy
closed
6 years ago
1
metabolomics integration
#11
svevol
closed
6 years ago
3
fix: use host user UID and GID
#10
Midnighter
opened
6 years ago
1
Permission denied when running the docker image
#9
Midnighter
opened
6 years ago
4
Dev
#8
psalvy
closed
6 years ago
1
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