Error while compiling using make file

[PrateekSharma99]

Good Afternoon, My name is Prateek Sharma, a PhD student from IIT Delhi, India. While setting up my mizuRoute model, I am getting the following error while compiling the code : (envi) [cez218605@chas006 ~/merra2_run/mizuRoute/mizuRoute-main/route/build] $ make fatal: Not a git repository (or any parent up to mount point /home) Stopping at filesystem boundary (GIT_DISCOVERY_ACROSS_FILESYSTEM not set). fatal: Not a git repository (or any parent up to mount point /home) Stopping at filesystem boundary (GIT_DISCOVERY_ACROSS_FILESYSTEM not set). fatal: Not a git repository (or any parent up to mount point /home) Stopping at filesystem boundary (GIT_DISCOVERY_ACROSSFILESYSTEM not set). gfortran -O3 -fmax-errors=0 -ffree-line-length-none -fopenmp -cpp -DVERSION=\"\" -DBRANCH=\"\" -DHASH=\"\" /home/civil/phd/cez218605/merra2 run/mizuRoute/mizuRoute-main/routebuild/src/nrtype.f90 /home/civil/phd/cez218605/merra2_run/mizuRoute/mizuRoute-main/routebuild/src/nr_utili ty.f90 /home/civil/phd/cez218605/merra2_run/mizuRoute/mizuRoute-main/routebuild/src/ascii_util.f90 /home/civil/phd/cez218605/merra2_run/miz uRoute/mizuRoute-main/routebuild/src/ncio_utils.f90 /home/civil/phd/cez218605/merra2_run/mizuRoute/mizuRoute-main/routebuild/src/gamma_func. f90 /home/civil/phd/cez218605/merra2_run/mizuRoute/mizuRoute-main/routebuild/src/public_var.f90 /home/civil/phd/cez218605/merra2_run/mizuRo ute/mizuRoute-main/routebuild/src/dataTypes.f90 /home/civil/phd/cez218605/merra2_run/mizuRoute/mizuRoute-main/routebuild/src/var_lookup.f90 /home/civil/phd/cez218605/merra2_run/mizuRoute/mizuRoute-main/routebuild/src/time_utils.f90 /home/civil/phd/cez218605/merra2_run/mizuRoute/ mizuRoute-main/routebuild/src/datetime_data.f90 /home/civil/phd/cez218605/merra2_run/mizuRoute/mizuRoute-main/routebuild/src/csv_data.f90 / home/civil/phd/cez218605/merra2_run/mizuRoute/mizuRoute-main/routebuild/src/gageMeta_data.f90 /home/civil/phd/cez218605/merra2_run/mizuRoute /mizuRoute-main/routebuild/src/obs_data.f90 /home/civil/phd/cez218605/merra2_run/mizuRoute/mizuRoute-main/routebuild/src/globalData.f90 /ho me/civil/phd/cez218605/merra2_run/mizuRoute/mizuRoute-main/routebuild/src/popMetadat.f90 /home/civil/phd/cez218605/merra2_run/mizuRoute/mizu Route-main/routebuild/src/allocation.f90 /home/civil/phd/cez218605/merra2_run/mizuRoute/mizuRoute-main/routebuild/src/network_topo.f90 /hom e/civil/phd/cez218605/merra2_run/mizuRoute/mizuRoute-main/routebuild/src/process_param.f90 /home/civil/phd/cez218605/merra2_run/mizuRoute/mi zuRoute-main/routebuild/src/process_ntopo.f90 /home/civil/phd/cez218605/merra2_run/mizuRoute/mizuRoute-main/routebuild/src/pfafstetter.f90 /home/civil/phd/cez218605/merra2_run/mizuRoute/mizuRoute-main/routebuild/src/domain_decomposition.f90 /home/civil/phd/cez218605/merra2_run/m izuRoute/mizuRoute-main/routebuild/src/remap.f90 /home/civil/phd/cez218605/merra2_run/mizuRoute/mizuRoute-main/routebuild/src/read_control.f 90 /home/civil/phd/cez218605/merra2_run/mizuRoute/mizuRoute-main/routebuild/src/read_param.f90 /home/civil/phd/cez218605/merra2_run/mizuRou te/mizuRoute-main/routebuild/src/read_streamSeg.f90 /home/civil/phd/cez218605/merra2_run/mizuRoute/mizuRoute-main/routebuild/src/write_strea mSeg.f90 /home/civil/phd/cez218605/merra2_run/mizuRoute/mizuRoute-main/routebuild/src/read_runoff.f90 /home/civil/phd/cez218605/merra2_run/ mizuRoute/mizuRoute-main/routebuild/src/get_basin_runoff.f90 /home/civil/phd/cez218605/merra2_run/mizuRoute/mizuRoute-main/routebuild/src/re ad_remap.f90 /home/civil/phd/cez218605/merra2_run/mizuRoute/mizuRoute-main/routebuild/src/read_restart.f90 /home/civil/phd/cez218605/merra2 _run/mizuRoute/mizuRoute-main/routebuild/src/write_restart.f90 /home/civil/phd/cez218605/merra2_run/mizuRoute/mizuRoute-main/routebuild/src/ write_simoutput.f90 /home/civil/phd/cez218605/merra2_run/mizuRoute/mizuRoute-main/routebuild/src/model_finalize.f90 /home/civil/phd/cez2186 05/merra2_run/mizuRoute/mizuRoute-main/routebuild/src/data_assimilation.f90 /home/civil/phd/cez218605/merra2_run/mizuRoute/mizuRoute-main/ro utebuild/src/accum_runoff.f90 /home/civil/phd/cez218605/merra2_run/mizuRoute/mizuRoute-main/routebuild/src/basinUH.f90 /home/civil/phd/cez2 18605/merra2_run/mizuRoute/mizuRoute-main/routebuild/src/irf_route.f90 /home/civil/phd/cez218605/merra2_run/mizuRoute/mizuRoute-main/routebu ild/src/kwt_route.f90 /home/civil/phd/cez218605/merra2_run/mizuRoute/mizuRoute-main/routebuild/src/dfw_route.f90 /home/civil/phd/cez218605/ merra2_run/mizuRoute/mizuRoute-main/routebuild/src/kw_route.f90 /home/civil/phd/cez218605/merra2_run/mizuRoute/mizuRoute-main/routebuild/src /mc_route.f90 /home/civil/phd/cez218605/merra2_run/mizuRoute/mizuRoute-main/routebuild/src/mainroute.f90 /home/civil/phd/cez218605/merra2 run/mizuRoute/mizuRoute-main/routebuild/src/model_setup.f90 /home/civil/phd/cez218605/merra2_run/mizuRoute/mizuRoute-main/routebuild/src/rout e_runoff.f90 \ -Wl,-rpath,~/anaconda3/envs/envi/bin//lib -L~/anaconda3/envs/envi/bin//lib -lnetcdff -lnetcdf -I~/anaconda3/envs/envi/bin//include -o route_r unoff gfortran: error: /home/civil/phd/cez218605/merra2_run/mizuRoute/mizuRoute-main/routebuild/src/nrtype.f90: No such file or directory gfortran: error: /home/civil/phd/cez218605/merra2_run/mizuRoute/mizuRoute-main/routebuild/src/nr_utility.f90: No such file or directory gfortran: error: /home/civil/phd/cez218605/merra2_run/mizuRoute/mizuRoute-main/routebuild/src/ascii_util.f90: No such file or directory gfortran: error: /home/civil/phd/cez218605/merra2_run/mizuRoute/mizuRoute-main/routebuild/src/ncio_utils.f90: No such file or directory gfortran: error: /home/civil/phd/cez218605/merra2_run/mizuRoute/mizuRoute-main/routebuild/src/gamma_func.f90: No such file or directory gfortran: error: /home/civil/phd/cez218605/merra2_run/mizuRoute/mizuRoute-main/routebuild/src/public_var.f90: No such file or directory gfortran: error: /home/civil/phd/cez218605/merra2_run/mizuRoute/mizuRoute-main/routebuild/src/dataTypes.f90: No such file or directory gfortran: error: /home/civil/phd/cez218605/merra2_run/mizuRoute/mizuRoute-main/routebuild/src/var_lookup.f90: No such file or directory gfortran: error: /home/civil/phd/cez218605/merra2_run/mizuRoute/mizuRoute-main/routebuild/src/time_utils.f90: No such file or directory gfortran: error: /home/civil/phd/cez218605/merra2_run/mizuRoute/mizuRoute-main/routebuild/src/datetime_data.f90: No such file or directory gfortran: error: /home/civil/phd/cez218605/merra2_run/mizuRoute/mizuRoute-main/routebuild/src/csv_data.f90: No such file or directory gfortran: error: /home/civil/phd/cez218605/merra2_run/mizuRoute/mizuRoute-main/routebuild/src/gageMeta_data.f90: No such file or directory gfortran: error: /home/civil/phd/cez218605/merra2_run/mizuRoute/mizuRoute-main/routebuild/src/obs_data.f90: No such file or directory gfortran: error: /home/civil/phd/cez218605/merra2_run/mizuRoute/mizuRoute-main/routebuild/src/globalData.f90: No such file or directory gfortran: error: /home/civil/phd/cez218605/merra2_run/mizuRoute/mizuRoute-main/routebuild/src/popMetadat.f90: No such file or directory gfortran: error: /home/civil/phd/cez218605/merra2_run/mizuRoute/mizuRoute-main/routebuild/src/allocation.f90: No such file or directory gfortran: error: /home/civil/phd/cez218605/merra2_run/mizuRoute/mizuRoute-main/routebuild/src/network_topo.f90: No such file or directory gfortran: error: /home/civil/phd/cez218605/merra2_run/mizuRoute/mizuRoute-main/routebuild/src/process_param.f90: No such file or directory gfortran: error: /home/civil/phd/cez218605/merra2_run/mizuRoute/mizuRoute-main/routebuild/src/process_ntopo.f90: No such file or directory gfortran: error: /home/civil/phd/cez218605/merra2_run/mizuRoute/mizuRoute-main/routebuild/src/pfafstetter.f90: No such file or directory gfortran: error: /home/civil/phd/cez218605/merra2_run/mizuRoute/mizuRoute-main/routebuild/src/domain_decomposition.f90: No such file or direc tory gfortran: error: /home/civil/phd/cez218605/merra2_run/mizuRoute/mizuRoute-main/routebuild/src/remap.f90: No such file or directory gfortran: error: /home/civil/phd/cez218605/merra2_run/mizuRoute/mizuRoute-main/routebuild/src/read_control.f90: No such file or directory gfortran: error: /home/civil/phd/cez218605/merra2_run/mizuRoute/mizuRoute-main/routebuild/src/read_param.f90: No such file or directory gfortran: error: /home/civil/phd/cez218605/merra2_run/mizuRoute/mizuRoute-main/routebuild/src/read_streamSeg.f90: No such file or directory gfortran: error: /home/civil/phd/cez218605/merra2_run/mizuRoute/mizuRoute-main/routebuild/src/write_streamSeg.f90: No such file or directory gfortran: error: /home/civil/phd/cez218605/merra2_run/mizuRoute/mizuRoute-main/routebuild/src/read_runoff.f90: No such file or directory gfortran: error: /home/civil/phd/cez218605/merra2_run/mizuRoute/mizuRoute-main/routebuild/src/get_basin_runoff.f90: No such file or directory gfortran: error: /home/civil/phd/cez218605/merra2_run/mizuRoute/mizuRoute-main/routebuild/src/read_remap.f90: No such file or directory gfortran: error: /home/civil/phd/cez218605/merra2_run/mizuRoute/mizuRoute-main/routebuild/src/read_restart.f90: No such file or directory gfortran: error: /home/civil/phd/cez218605/merra2_run/mizuRoute/mizuRoute-main/routebuild/src/write_restart.f90: No such file or directory gfortran: error: /home/civil/phd/cez218605/merra2_run/mizuRoute/mizuRoute-main/routebuild/src/write_simoutput.f90: No such file or directory gfortran: error: /home/civil/phd/cez218605/merra2_run/mizuRoute/mizuRoute-main/routebuild/src/model_finalize.f90: No such file or directory gfortran: error: /home/civil/phd/cez218605/merra2_run/mizuRoute/mizuRoute-main/routebuild/src/data_assimilation.f90: No such file or director y gfortran: error: /home/civil/phd/cez218605/merra2_run/mizuRoute/mizuRoute-main/routebuild/src/accum_runoff.f90: No such file or directory gfortran: error: /home/civil/phd/cez218605/merra2_run/mizuRoute/mizuRoute-main/routebuild/src/basinUH.f90: No such file or directory gfortran: error: /home/civil/phd/cez218605/merra2_run/mizuRoute/mizuRoute-main/routebuild/src/irf_route.f90: No such file or directory gfortran: error: /home/civil/phd/cez218605/merra2_run/mizuRoute/mizuRoute-main/routebuild/src/kwt_route.f90: No such file or directory gfortran: error: /home/civil/phd/cez218605/merra2_run/mizuRoute/mizuRoute-main/routebuild/src/dfw_route.f90: No such file or directory gfortran: error: /home/civil/phd/cez218605/merra2_run/mizuRoute/mizuRoute-main/routebuild/src/kw_route.f90: No such file or directory gfortran: error: /home/civil/phd/cez218605/merra2_run/mizuRoute/mizuRoute-main/routebuild/src/mc_route.f90: No such file or directory gfortran: error: /home/civil/phd/cez218605/merra2_run/mizuRoute/mizuRoute-main/routebuild/src/main_route.f90: No such file or directory gfortran: error: /home/civil/phd/cez218605/merra2_run/mizuRoute/mizuRoute-main/routebuild/src/model_setup.f90: No such file or directory gfortran: error: /home/civil/phd/cez218605/merra2_run/mizuRoute/mizuRoute-main/routebuild/src/route_runoff.f90: No such file or directory make: *** [compile] Error 1

This is the make file Can anyone guide me through.

[SoldeMexico]

Good Morning, My name is Matias Moreno a student from Universidad Diego Portales, Chile. i am getting the same error while compiling the code. How did you solve it?

Beforehand thank you very much.

[nmizukami]

if you get the same compiling error, your path to source code (under route/build/src/) in makefile is wrong. The above case, the path specified in F_MASTER is missing/ at the end.

If you try locating by typing ls /home/civil/phd/cez218605/merra2_run/mizuRoute/mizuRoute-main/routebuild/src, are you able to see the files? or you get message something like saying directory does not exist?

[SoldeMexico]

Thanks for the quick response, I receive the message that the directory does not exist.

[SoldeMexico]

In the Bin folder, an executable was created that delivers the message "FATAL ERROR: need to supply name of the control file as a command-line argument" as indicated in the installation document.

I really appreciate your quick help.