jedwards4b
commented
3 months ago @cacraigucar Thank you for opening an issue here, I'm not sure why I missed it until now.
I just tried and I had not at all the same experience as you did on izumi - any idea why? I was able to clone and checkout this cam branch without any problems.
/home/jedwards/cam6_3_150.rme
python --version
Python 3.7.0
git clone https://github.com/jedwards4b/CAM -b zz_rme/cam6_3_150 cam6_3_150.rme
Cloning into 'cam6_3_150.rme'...
remote: Enumerating objects: 36908, done.
remote: Counting objects: 100% (2448/2448), done.
remote: Compressing objects: 100% (1120/1120), done.
remote: Total 36908 (delta 1473), reused 2143 (delta 1256), pack-reused 34460
Receiving objects: 100% (36908/36908), 40.34 MiB | 31.70 MiB/s, done.
Resolving deltas: 100% (26550/26550), done.
Updating files: 100% (2207/2207), done.
[jedwards@izumi ~]$ cd cam6_3_150.rme/
[jedwards@izumi cam6_3_150.rme]$ ./bin/git-fleximod update
e chem_proc not checked out, aligned at tag chem_proc5_0_05
e carma not checked out, aligned at tag carma4_01
e cosp2 not checked out, aligned at tag v2.1.4cesm
e clubb not checked out, aligned at tag clubb_4ncar_20221129_59cb19f_20230330_branchtag
e pumas not checked out, aligned at tag pumas_cam-release_v1.35
e pumas-frozen not checked out, aligned at tag pumas_cam-release_v1.17_rename
e ali_arms not checked out, aligned at tag ALI_ARMS_v1.0.1
e atmos_phys not checked out, aligned at tag atmos_phys0_02_000
e atmos_cubed_sphere not checked out, aligned at tag fv3_cesm.04
e mpas not checked out, aligned at hash b8c33daa
e geoschem not checked out, aligned at tag 14.1.2
e hemco not checked out, out of sync at tag None, expected tag is rme/hemco-cesm1_2_1_hemco3_6_3_cesm
e rte-rrtmgp not checked out, aligned at tag v1.7
e rrtmgp-data not checked out, aligned at tag v1.8
Successfully checked out ccs_config
ccs_config up to date.
Successfully checked out cice5
cice5 up to date.
Recursively checking out submodules of cice6
e cice not checked out, aligned at tag cice6_5_0_20240222
Recursively checking out submodules of cice
e icepack has no fxtag defined in .gitmodules
Successfully checked out icepack
Successfully checked out cice
Successfully checked out cice6
cice6 updated to rme/cesm_cice6_5_0_7
Successfully checked out cmeps
cmeps up to date.
Recursively checking out submodules of cdeps
e fox not checked out, aligned at tag 4.1.2.1
e genf90 not checked out, aligned at hash 4816965
Successfully checked out fox
Successfully checked out genf90
Successfully checked out cdeps
cdeps updated to rme/cdeps1.0.28
Successfully checked out cpl7
cpl7 up to date.
Successfully checked out share
share up to date.
Successfully checked out mct
mct up to date.
Successfully checked out parallelio
parallelio up to date.
Recursively checking out submodules of cime
e CIME/non_py/cprnc not checked out, aligned at tag v1.0.6
Successfully checked out CIME/non_py/cprnc
Successfully checked out cime
cime up to date.
Successfully checked out cism
cism up to date.
Recursively checking out submodules of clm
e fates not checked out, aligned at tag sci.1.71.0_api.33.0.0
Successfully checked out fates
Successfully checked out clm
clm up to date.
Successfully checked out fms
fms up to date.
Successfully checked out mosart
mosart up to date.
Successfully checked out rtm
rtm up to date.
Successfully checked out chem_proc
chem_proc up to date.
Successfully checked out carma
carma up to date.
Successfully checked out cosp2 at v2.1.4cesm
cosp2 up to date.
Successfully checked out clubb at clubb_4ncar_20221129_59cb19f_20230330_branchtag
clubb up to date.
Successfully checked out pumas
pumas up to date.
Successfully checked out pumas-frozen
pumas-frozen up to date.
Successfully checked out ali_arms
ali_arms up to date.
Successfully checked out atmos_phys
atmos_phys up to date.
Successfully checked out atmos_cubed_sphere
atmos_cubed_sphere up to date.
Successfully checked out mpas at b8c33daa
mpas updated to b8c33daa
Successfully checked out geoschem
geoschem up to date.
Recursively checking out submodules of hemco
e HEMCO not checked out, aligned at tag 3.6.3-cesm
Recursively checking out submodules of HEMCO
e docs/source/geos-chem-shared-docs has no fxtag defined in .gitmodules
Successfully checked out docs/source/geos-chem-shared-docs
Successfully checked out HEMCO
Successfully checked out hemco
hemco updated to rme/hemco-cesm1_2_1_hemco3_6_3_cesm
Successfully checked out rte-rrtmgp
rte-rrtmgp up to date.
Successfully checked out rrtmgp-data
rrtmgp-data up to date.
With the latest push to ESCOMP/CAM #989, I get the following:
izumi$ git checkout zz_rme/cam6_3_150 Updating files: 100% (2207/2207), done. branch 'zz_rme/cam6_3_150' set up to track 'origin/zz_rme/cam6_3_150'. Switched to a new branch 'zz_rme/cam6_3_150' izumi$ bin/git-fleximod update Traceback (most recent call last): File "/scratch/cluster/cacraig/cam5_remove_manage_externals/.lib/git-fleximod/git_fleximod/gitinterface.py", line 17, in init import git ModuleNotFoundError: No module named 'git'
During handling of the above exception, another exception occurred:
Traceback (most recent call last): File "/scratch/cluster/cacraig/cam5_remove_manage_externals/bin/git-fleximod", line 8, in
sys.exit(main())
^^^^^^
File "/scratch/cluster/cacraig/cam5_remove_manage_externals/.lib/git-fleximod/git_fleximod/git_fleximod.py", line 513, in main
submodules_update(gitmodules, root_dir, fxrequired, force)
File "/scratch/cluster/cacraig/cam5_remove_manage_externals/.lib/git-fleximod/git_fleximod/git_fleximod.py", line 307, in submodulesupdate
, localmods, needsupdate = submodules_status(gitmodules, root_dir)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "/scratch/cluster/cacraig/cam5_remove_manage_externals/.lib/git-fleximod/git_fleximod/git_fleximod.py", line 252, in submodules_status
rootgit = GitInterface(root_dir, logger)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "/scratch/cluster/cacraig/cam5_remove_manage_externals/.lib/git-fleximod/git_fleximod/gitinterface.py", line 28, in init
if not (repo_path / ".git").exists():