[EMAC] automatization

[axel-lauer]

Set up framework to call ESMValTool in quicklook mode from within EMAC postprocessing job.

Tasks

• [x] set up environment module

[bjoernbroetz]

To set up the environment modules file we will do the following steps:

• Install the esmvalcore and esmvaltool in development mode into a new conda environment using the appropriate branches.
• Create the modulefile to configure the environment modules:

  
  #%Module1.0##############
  ##
  ## modules Quicklooksystem
  ##
  ##

set condadir /path/to/conda/environment

proc ModulesHelp { } { global version prefix

    puts stderr "\tESMValTool Quicklooksystem\n"
    puts stderr "\t\n"
    puts stderr "\tATTENTION: Environment for python is changed\n"

} puts stderr "module esmvaltool:\n" puts stderr "\tATTENTION: Environment for python has been changed\n"

module-whatis "ESMValTool Quicklooksystem Environment"

module unload python

unsetenv PYTHONPATH

prepend-path PATH ${condadir}/bin prepend-path PYTHONPATH ${topdir} setenv UDUNITS2_XML_PATH ${condadir}/share/udunits/udunits2.xml setenv PROJ_LIB ${condadir}/share/proj setenv CONDA_PYTHON_EXE ${condadir}/bin/python

- place this file in central accessible location
- the command from the runscript is then:

module use -a /path/to/modulefile module load NAME_OF_MODULEFILE