Moved R script to bin, so we don't need back slashes.
Created a loop so that the script detects which taxonomy iDs we have in the database (now less repetitive R code too). Sometimes kingdom is missing, so now it will only print the tax IDs that are present in the file.
New container for r processing with "hash"
removed old params in confs
Moved R script to bin, so we don't need back slashes. Created a loop so that the script detects which taxonomy iDs we have in the database (now less repetitive R code too). Sometimes kingdom is missing, so now it will only print the tax IDs that are present in the file. New container for r processing with "hash" removed old params in confs