EcoJulia / Diversity.jl

Julia package for diversity measurement
http://docs.ecojulia.org/Diversity.jl/
BSD 2-Clause "Simplified" License
34 stars 9 forks source link

Separation #13

Closed richardreeve closed 7 years ago

richardreeve commented 7 years ago

We need a way of separating out the partitioning of the metacommunity from the types present from the relative abundances, and this is it...

coveralls commented 7 years ago

Coverage Status

Coverage decreased (-4.9%) to 70.335% when pulling ad48b8d70cea6bc1229a66ccdda72c38e9929bd9 on separation into 5f9688717aacf042eca22783319f05ac103d16a9 on master.

coveralls commented 7 years ago

Coverage Status

Coverage increased (+2.3%) to 77.512% when pulling 79f840a685ad8060c91a93a00f80c6db71f3580f on separation into 5f9688717aacf042eca22783319f05ac103d16a9 on master.

coveralls commented 7 years ago

Coverage Status

Coverage increased (+2.3%) to 77.512% when pulling 79f840a685ad8060c91a93a00f80c6db71f3580f on separation into 5f9688717aacf042eca22783319f05ac103d16a9 on master.

coveralls commented 7 years ago

Coverage Status

Coverage increased (+2.3%) to 77.512% when pulling 79f840a685ad8060c91a93a00f80c6db71f3580f on separation into 5f9688717aacf042eca22783319f05ac103d16a9 on master.

coveralls commented 7 years ago

Coverage Status

Coverage increased (+2.3%) to 77.512% when pulling 79f840a685ad8060c91a93a00f80c6db71f3580f on separation into 5f9688717aacf042eca22783319f05ac103d16a9 on master.

codecov-io commented 7 years ago

Codecov Report

Merging #13 into master will increase coverage by 17.17%. The diff coverage is 88.88%.

Impacted file tree graph

@@             Coverage Diff             @@
##           master      #13       +/-   ##
===========================================
+ Coverage   75.23%   92.41%   +17.17%     
===========================================
  Files           7        8        +1     
  Lines         210      290       +80     
===========================================
+ Hits          158      268      +110     
+ Misses         52       22       -30
Impacted Files Coverage Δ
src/DiversityMeasure.jl 100% <100%> (+21.12%) :arrow_up:
src/Jost.jl 100% <100%> (ø) :arrow_up:
src/Hill.jl 100% <100%> (ø) :arrow_up:
src/Ecology.jl 100% <100%> (ø) :arrow_up:
src/GeneralisedDiversities.jl 100% <100%> (+66.66%) :arrow_up:
src/EffectiveNumbers.jl 100% <100%> (ø) :arrow_up:
src/Metacommunity.jl 77.21% <77.21%> (+5.61%) :arrow_up:
src/Interface.jl 80.95% <80.95%> (ø)

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coveralls commented 7 years ago

Coverage Status

Coverage increased (+3.2%) to 78.469% when pulling 3482e3aa82a5f1aa842a243dd1b80baac0e30ab0 on separation into 5f9688717aacf042eca22783319f05ac103d16a9 on master.

richardreeve commented 7 years ago

This now also fixes #7 / #10, so everything returns a DataFrame, and removes all current deprecations related to Julia v0.6.

coveralls commented 7 years ago

Coverage Status

Coverage increased (+7.1%) to 82.353% when pulling e4e690e810790b038813af45188efc3a5b901fe5 on separation into 5f9688717aacf042eca22783319f05ac103d16a9 on master.

coveralls commented 7 years ago

Coverage Status

Coverage increased (+7.1%) to 82.353% when pulling d8b730572da929593af2a210a8663758514a3929 on separation into 5f9688717aacf042eca22783319f05ac103d16a9 on master.

coveralls commented 7 years ago

Coverage Status

Coverage increased (+7.1%) to 82.353% when pulling 3f64bfdd6f35eafca9038001b2971651a7aa463e on separation into 5f9688717aacf042eca22783319f05ac103d16a9 on master.

coveralls commented 7 years ago

Coverage Status

Coverage increased (+12.3%) to 87.5% when pulling 53d988d24724030e21695246d3342f5fec7fd753 on separation into 5f9688717aacf042eca22783319f05ac103d16a9 on master.

coveralls commented 7 years ago

Coverage Status

Coverage increased (+12.3%) to 87.5% when pulling 53d988d24724030e21695246d3342f5fec7fd753 on separation into 5f9688717aacf042eca22783319f05ac103d16a9 on master.

coveralls commented 7 years ago

Coverage Status

Coverage increased (+7.3%) to 82.534% when pulling dc445e557d290c4afebd416b0bbcbc7adb41f452 on separation into 5f9688717aacf042eca22783319f05ac103d16a9 on master.

coveralls commented 7 years ago

Coverage Status

Coverage increased (+16.5%) to 91.781% when pulling d9504ca5f6b68562daf01e89fafc48e74db48851 on separation into 5f9688717aacf042eca22783319f05ac103d16a9 on master.

coveralls commented 7 years ago

Coverage Status

Coverage increased (+17.2%) to 92.414% when pulling 594774e977841711178b4615fff0ca4822461065 on separation into 5f9688717aacf042eca22783319f05ac103d16a9 on master.

richardreeve commented 7 years ago

Fixes #7 and #10.