Diversity.Phylogenetics

[richardreeve]

Update phylogenetic diversity code and docs

[coveralls]

Pull Request Test Coverage Report for Build 776043648

Warning: This coverage report may be inaccurate.

This pull request's base commit is no longer the HEAD commit of its target branch. This means it includes changes from outside the original pull request, including, potentially, unrelated coverage changes.

• For more information on this, see Tracking coverage changes with pull request builds.
• To avoid this issue with future PRs, see these Recommended CI Configurations.
• For a quick fix, rebase this PR at GitHub. Your next report should be accurate.

Details

• 1 of 2 (50.0%) changed or added relevant lines in 2 files are covered.
• 12 unchanged lines in 5 files lost coverage.
• Overall coverage increased (+5.7%) to 86.575%

---

Changes Missing Coverage	Covered Lines	Changed/Added Lines	%
src/Phylogenetics.jl	0	1	0.0%
<!--	Total:	1	2	50.0%	-->

Files with Coverage Reduction	New Missed Lines	%
src/DiversityMeasure.jl	1	93.27%
src/Partition.jl	1	90.0%
src/API.jl	3	77.27%
src/Interface.jl	3	58.06%
src/Types.jl	4	82.35%
<!--	Total:	12		-->

Totals
Change from base Build 773808388:	5.7%
Covered Lines:	503
Relevant Lines:	581

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💛 - Coveralls

[codecov-commenter]

Codecov Report

Merging #40 (3ad1a6c) into dev (b01b441) will not change coverage. The diff coverage is 83.33%.

@@           Coverage Diff           @@
##              dev      #40   +/-   ##
=======================================
  Coverage   80.73%   80.73%           
=======================================
  Files          15       15           
  Lines         623      623           
=======================================
  Hits          503      503           
  Misses        120      120           

Impacted Files	Coverage Δ
src/Phylogenetics.jl	83.67% <75.00%> (ø)
src/Diversity.jl	87.50% <100.00%> (ø)

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