Closed Askars closed 9 years ago
bamm make -d Isca_2_Bulk1ml_CLC_contigs.gt1000.fa -c ISCA-2-Bulk1ml_all_R1.fastq.gz ISCA-2-Bulk1ml_all_R2.fastq.gz -t 10 -K
Eventually runs (with 1010G of memory):
samtools sort -m 1010G - /srv/projects/moore_foundation/isca_2_assemble_nextseq_16/Isca_2_Bulk1ml_CLC_contigs.gt1000.ISCA-2-Bulk1ml_all_R1
moly holy.
will look into it
bamm make -d Isca_2_Bulk1ml_CLC_contigs.gt1000.fa -c ISCA-2-Bulk1ml_all_R1.fastq.gz ISCA-2-Bulk1ml_all_R2.fastq.gz -t 10 -K
Eventually runs (with 1010G of memory):
samtools sort -m 1010G - /srv/projects/moore_foundation/isca_2_assemble_nextseq_16/Isca_2_Bulk1ml_CLC_contigs.gt1000.ISCA-2-Bulk1ml_all_R1