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Ecogenomics / BamM

Metagenomics-focused BAM file manipulation
http://ecogenomics.github.io/BamM/
GNU Lesser General Public License v3.0
16 stars 7 forks source link

BamM Filter #25

Closed timbalam closed 9 years ago

timbalam commented 9 years ago

Introducing BamM filter command. Filter reads by mapping identity and length percentages. Also includes a shell script for testing.

wwood commented 9 years ago

Hey Mike do you have any comments? Tim is going to convert the shell tests into python tests to make things all standard-like, but anything else?

There's a lot of autogenerated files here, are they necessary? http://stackoverflow.com/questions/3290908/which-files-generated-by-autotools-should-i-keep-in-version-control-repository