bamm trimmed mean cannot be specified asymmetrically

Ecogenomics / BamM

Metagenomics-focused BAM file manipulation

http://ecogenomics.github.io/BamM/

GNU Lesser General Public License v3.0

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Closed wwood closed 9 years ago

wwood commented 9 years ago

I have a dream, of estimating coverage using pileup columns in the 60-90% range.

Currently this

cannot be specified on the bamm cmdline (-r takes a float)
isn't given to the C code (the bamInfo struct or whatever it is called only has a single parameter, when two are required).

minillinim commented 9 years ago

fixed.

Your dreams have come true