Ecogenomics / CheckM

Assess the quality of microbial genomes recovered from isolates, single cells, and metagenomes
https://ecogenomics.github.io/CheckM/
GNU General Public License v3.0
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How to check CheckM database version? #306

Closed jolespin closed 3 years ago

jolespin commented 3 years ago

I'm compiling all of my results into a publication and was including database versions for GTDB-Tk, KOFAMSCAN, and CheckV. Is there a way to determine database version for CheckM or should I just put the access date?

donovan-h-parks commented 3 years ago

There has only been one version of the CheckM reference data: https://data.ace.uq.edu.au/public/CheckM_databases/

jolespin commented 3 years ago

Ok good to know. I will close this issue.