Make sure pplacer is on your system path.

Ecogenomics / CheckM

Assess the quality of microbial genomes recovered from isolates, single cells, and metagenomes

https://ecogenomics.github.io/CheckM/

GNU General Public License v3.0

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Closed apjim0527 closed 9 months ago

apjim0527 commented 9 months ago

Hi, please help me to solve the error: "make sure pplacer is on your system path."

I can't seem to search the steps in downloading and installing pplacer.

apjim0527 commented 9 months ago

Thanks to D. Peterson for this useful solution https://matsen.github.io/pplacer/compiling.html. The issue is solved.