search

Ecogenomics / GTDBTk

GTDB-Tk: a toolkit for assigning objective taxonomic classifications to bacterial and archaeal genomes.
https://ecogenomics.github.io/GTDBTk/
GNU General Public License v3.0
470 stars 82 forks source link

No sequence results for archaea in the align folder of classify_wf #593

Closed Liuhanlin22 closed 3 months ago

Liuhanlin22 commented 4 months ago

bin.ar53.summary.tsv and bin.bac120.summary.tsv are both in the classify folder, and the results are normal, but the align folder only has the results of the bacterial alignment sequence, and the results of the fungal alignment do not exist. I tried four libraries, all of which were like this. My input file was a dRep-filtered bin file. What caused this? I tested other people's data and it was normal, is there something wrong with my data. But why bin.ar53.summary.tsv is normal again, only the align file does not exist. 28e859854baf6a37cf9d1534d134d9c 9dc355a7fe80239d42b1aa75c6d1379

pchaumeil commented 3 months ago

Hello, Please provide the commands you are running and the log files for all these commands.

Thanks, Pierre

pchaumeil commented 3 months ago

Ticket closed due to inactivity.