Is it possible to filter the results based on the percentage of identical matches ( or %coverage) or execute the hmmsearch to get reliable results based on these criteria?
Do you have other suggestions to filter the results and to get only the reliable annotation?
I really appreciate any help you can provide.
Best regards
Hi,
I'm using hmmsearch to understand if a model of interest is present in a set of ORFs predicted by Prodigal. Specifically, I'm using the following code
Is it possible to filter the results based on the percentage of identical matches ( or %coverage) or execute the hmmsearch to get reliable results based on these criteria? Do you have other suggestions to filter the results and to get only the reliable annotation?
I really appreciate any help you can provide. Best regards