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EdwinChingate / Microbes-Guts-Simulator

Simulacion de la interacion metabolica en la microbiota de lactantes usando BacArena
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Absorption model #2

Open EdwinChingate opened 8 months ago

EdwinChingate commented 8 months ago

Update the absorption model, by estimating the mass transfer constant that would drive to full absorption of all the nutrients

EdwinChingate commented 8 months ago

Make the absorption efficiency compound-specific

EdwinChingate commented 8 months ago

Take into account the space grid, consume all the metabolites

EdwinChingate commented 8 months ago

Apply the absorption model just to the cells closer to the walls

EdwinChingate commented 8 months ago

Change the absorption list retrieved by the MetabolitesAbsorbed function, for a matrix including the id's and the specific absorption efficiency.