Open jeffchen2000 opened 1 month ago
This looks like new behavior with apptainer. There's a good explanation I found in the Max Planck computing documentation: https://docs.mpcdf.mpg.de/bnb/211.html#notes-on-the-sylabs-cloud-endpoint
I'll need to update the documentation in PAV. Thanks for pointing this out.
thanks a lot paudano!!!
it worked with the followings: apptainer remote add --no-login SylabsCloud cloud.sylabs.io apptainer remote use SylabsCloud apptainer run --bind "$(pwd):$(pwd)" library://becklab/pav/pav:latest -c 16
I am going to leave this open to remind me to update the documentation. I don't need anything else from you. Thank you for reporting this!
Hi EichlerLab
apptainer is updated version of singularity
when I run it, I got error. thanks for comments!
apptainer run --bind "$(pwd):$(pwd)" library://becklab/pav/pav:latest -c 16 FATAL: Unable to handle library://becklab/pav/pav:latest uri: remote has no library client