arneelof
commented
2 years ago As stated on the homepage there is a limit to sequences to be max 10000 residues long Tition is about 34K (and it is well known that it is not a TM protein - so a bit of waste to try to predict it). Try to divide it into smaller parts.
Yours
Arne
Arne Elofsson Science for Life Laboratory Tel:+46-(0)70 695 1045 Stockholm University http://bioinfo.se/ Box 1031, Email: @.*** 17121 Solna, Sweden Twitter: https://twitter.com/arneelof Zoom: https://stockholmuniversity.zoom.us/my/arneelof/ Scholar: http://scholar.google.se/citations?user=s3OCM3AAAAAJ ORCID: 0000-0002-7115-9751 https://orcid.org/0000-0002-7115-9751
On Sat, Jun 11, 2022 at 12:00 AM khoroshyy @.***> wrote:
Hi. I am running topcons2 using singularity; most proteins get predicted, but some are not. An example of the error file is attached. I am not sure what is wrong. Thanks. Petro.
error.zip https://github.com/ElofssonLab/TOPCONS2/files/8882471/error.zip
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Hi. I am running topcons2 using singularity; most proteins get predicted, but some are not. An example of the error file is attached. I am not sure what is wrong. Thanks. Petro.
error.zip