Closed SewoongLee closed 1 year ago
FYI, manually selecting 'flat_features.sql' works fine.
It seems there is some problem in pre-processing time-series.py.
And I don't know why it is referencing eICU data even though it is MIMIC-IV pre-processing.
My psql version is 15.2, but it seems crosstab
keyword is not working in flat_featrues.sql
I installed crosstab
in tablefunc
.
Now I am re-running this.
https://stackoverflow.com/questions/3002499/postgresql-crosstab-query
In my case, I had to use $$
in query.
https://stackoverflow.com/questions/59500585/what-is-wrong-in-my-crosstab-postgres-query
There was an empty data error when running
-m MIMIC_preprocessing.run_all_preprocessing
Is it ok that my flat_features.csv file is empty...?![image](https://user-images.githubusercontent.com/7731970/230800989-db64e04c-453d-470c-85c9-76047b8e5726.png)