EmoryUniversityTheoreticalBiophysics / SirIsaac

Automated dynamical systems inference
MIT License
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Data for given independent parameters cannot consist of a single timepoint at t=0 #5

Open bcdaniels opened 8 years ago

bcdaniels commented 8 years ago

Due to what appears to be a limitation of SloppyCell's Network.calculate, including data for given independent parameters that consists of a single timepoint at t=0 produces a "list index out of range" error from Dynamics.integrate.

For now we will disallow this, as it seems to be somewhat unlikely. A hacky way to get around it is to change lonely t=0 data to, e.g., t=10^-40. In the future we may want to revise this in SloppyCell.