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Ensembl / WiggleTools

Basic operations on the space of numerical functions defined on the genome using lazy evaluators for flexibility and efficiency
Apache License 2.0
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bufferedReader.c compilation error #59

Closed gevro closed 3 years ago

gevro commented 3 years ago

Error below. Looks like include of string.h is missing.

cc -g -Wall -O3 -std=gnu99 -I../../libBigWig -I../../htslib -D_PBGZF_USE -c bufferedReader.c -o bufferedReader.o
bufferedReader.c:188:9: error: implicitly declaring library function 'strcmp' with type 'int (const char *, const char *)'
      [-Werror,-Wimplicit-function-declaration]
        return strcmp(cl_A->chrom, cl_B->chrom);
               ^
bufferedReader.c:188:9: note: include the header <string.h> or explicitly provide a declaration for 'strcmp'
1 error generated.
make[1]: *** [bufferedReader.o] Error 1
make: *** [Wiggletools] Error 2
dzerbino commented 3 years ago

Hello @gevro ,

Evidently my compiler has been treating this as a warning all along, now fixed.

Cheers,

Daniel