EnvironmentOntology / environmental-exposure-ontology

Modular environmental exposures ontology
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Compare MRE classification with ECTO #12

Open cmungall opened 7 years ago

cmungall commented 7 years ago

Related to #6

ECTO's classification is based entirely on CHEBI and our OWL defs. MRE is manual.

In have aligned ECTO and MRE, and compared classifications:

I will break down the categories here:

More to be added later

nicolevasilevsky commented 7 years ago

@cmungall I'm not sure what I am meant to be looking for here, could you explain further or could we have a call?

nicolevasilevsky commented 7 years ago

@cmungall maybe we could set up a call to discuss what the action items needed here are? Maybe Kayli could help too?

cmungall commented 7 years ago

The goal here is to recapitulate the assertions via inference (unless the assertions are wrong), and to avoid inferred things that are not asserted (unless they are should be there).

In this case it sounds like we need a new CHEBI class with our desired semantics

nicolevasilevsky commented 7 years ago

Thanks @cmungall. I will be out of town next week but I'll aim to work on this the week of July 24, and I will let you know if I have any questions.

cmungall commented 7 years ago

In this case it sounds like we need a new CHEBI class with our desired semantics

If this is confusing it's because I thought I was responding to #13