Create a complete workflow for the Farlik 2016 data set

Epigenomics-Screw / Screw

SCREW: A Reproducible Workflow for Single-Cell Epigenomics

MIT License

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Create a complete workflow for the Farlik 2016 data set #30

Open oneillkza opened 6 years ago

oneillkza commented 6 years ago

Description

As a bioinformatician, I would like to run the complete workflow, including generating QC plots, pairwise clustering, regional methylation, and DMR analysis on the Farlik 2016 data set, in order to include it in the broader meta-analysis.

Estimate

Priority

MUST

Notes

A beginning on this has been made at https://github.com/Epigenomics-Screw/Farlik_2016_Example

oneillkza commented 6 years ago

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5145815/