Tool wish list - Githubissues

ErasmusMC-Bioinformatics / galaxytools-emc

Tool Shed repositories maintained and developed by the Erasmus University Medical Center, following best practices guidelines set out by the Intergalactic Utilities Commission https://wiki.galaxyproject.org/IUC

MIT License

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Tool wish list #51

Open shiltemann opened 6 years ago

shiltemann commented 6 years ago

@rjansen1984 (and others) als je hier lijst met tools kunt opschrijven die we graag in Galaxy zouden willen zien?

[x] Canu (conda: yes, github repo, readthedocs)
[x] Minimap (conda: yes, github repo)
[x] Miniasm (conda: yes, github repo)
[ ] ResFinder (conda: no, bitbucket repo)
[ ] NGMLR (conda:yes, github repo)
[x] poretools
[x] nanopolish
[x] nanoplot (conda: yes, github)
[ ] Annovar
[ ] OncoCNV
[ ] CodecZ
[ ] PCGR
[ ] TMAP
[ ] TVC (Torrent Variant Caller)
[ ] CoverageTool (UMCU)
[x] BCFtools
[ ] Circlator

rjansen1984 commented 6 years ago

Hier alvast een klein lijstje

Canu
Minimap
Miniasm
ResFinder

davidvanzessen commented 6 years ago

There is a tool for minimap2 from iuc.

davidvanzessen commented 6 years ago

And Canu also has a tool from bgruening

niels-k commented 6 years ago

[ ] Annovar
[ ] OncoCNV
[ ] CodecZ
[ ] PCGR
[ ] TMAP
[ ] TVC (Torrent Variant Caller)
[ ] CoverageTool (UMCU)
[ ] BCFtools
[ ] Intervar