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EricR86 / segway-issues-proxy

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Identify requires params/input.master present in identifydir #17

Closed EricR86 closed 10 years ago

EricR86 commented 10 years ago

From stevenpwilder@gmail.com on May 04, 2011 11:34:00

Using version 1.0.2 after training, segway identify genomedata traindir identifydir failed with error

IOError: [Errno 2] No such file or directory: path('identifydirname/params/input.master')

Copying the file from the traindir fixes the issue.

Original issue: http://code.google.com/p/segway-genome/issues/detail?id=17

EricR86 commented 10 years ago

From hoffman...@gmail.com on May 09, 2011 15:34:50

Is this issue still present in Segway 1.1.0?

EricR86 commented 10 years ago

From hoffman...@gmail.com on May 12, 2011 14:35:05

I think this issue should no longer be present. Please re-open if you continue to have problems.

Status: Fixed

EricR86 commented 10 years ago

From stevenpwilder@gmail.com on May 16, 2011 09:46:44

The issue remains in Segway 1.1.0.

EricR86 commented 10 years ago

From hoffman...@gmail.com on May 16, 2011 10:35:35

Can you please attach traindir/log/segway.sh and traindir/train.tab from a problematic training run? Thanks!

Status: New

EricR86 commented 10 years ago

From stevenpwilder@gmail.com on May 17, 2011 01:48:45

I'm attaching the files, although it is the identification stage that is causing the issue. Thanks.

Attachment: train.tab segway.sh

EricR86 commented 10 years ago

From hoffman...@gmail.com on May 17, 2011 14:39:16

The issue is in generating the train.tab file, which is what the identify task uses to find the master file. Using the new Segway to train should generate the correct train.tab file. Or, as a transitional workaround, you can edit train.tab to include the correct file name.

Status: Fixed