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EtienneCmb / visbrain

A multi-purpose GPU-accelerated open-source suite for brain data visualization
http://visbrain.org
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Visbrain in IronPython #21

Closed STREETKILLER007 closed 6 years ago

STREETKILLER007 commented 6 years ago

I am using Window 7, 64 bit version.

I am trying to implement visbrain using ironPython in Visual Studio 2017, framework 4.0.

below is my iron python environment :
IronPython v2.7.8 IronPython.StdLib v2.7.8.1

This is the code that i am working on.

// create python engine
var myPythonEngine = Python.CreateEngine();

// create search path
var searchPaths = myPythonEngine.GetSearchPaths();

searchPaths.Add(@"D:\Python35\");
searchPaths.Add(@"D:\Python35\Scripts\");
searchPaths.Add(@"D:\Python35\Lib"); // python standard library

// set search path
myPythonEngine.SetSearchPaths(searchPaths);

// create scope to execute python code and get backs results from python code
var myScope = myPythonEngine.CreateScope();

// create the source
var mySource = myPythonEngine.CreateScriptSourceFromFile(@"testtopo.py");

// execute the scope
mySource.Execute(myScope);

testtopo.py only contains 2 lines of code, which is 

from visbrain import Topo

# Create a topoplot instance :
t = Topo()

But it pops out an error said IronPython.Runtime.Exceptions.ImportException: 'No module named visbrain'

Would like to know what have i miss out, so that i can solve this issue. Thank You.

EtienneCmb commented 6 years ago

GitMate.io thinks possibly related issues are https://github.com/EtienneCmb/visbrain/issues/4 (installing visbrain), https://github.com/EtienneCmb/visbrain/issues/10 (Update and/or redirect links to visbrain modules), and https://github.com/EtienneCmb/visbrain/issues/17 (Hello I cant open visbrain everytime i get same error ).

STREETKILLER007 commented 6 years ago

refer to this solved by adding 2 line

searchPaths.Add(@"D:\Python35\DLLs");
searchPaths.Add(@"D:\Python35\lib\site-packages");

but after this 2 line, pops out another error, which is

Exception thrown: 'Microsoft.Scripting.SyntaxErrorException' in Microsoft.Dynamic.dll
An unhandled exception of type 'Microsoft.Scripting.SyntaxErrorException' occurred in Microsoft.Dynamic.dll
unexpected token 'exc_info'

this is the detail of the error 

Microsoft.Scripting.SyntaxErrorException
  HResult=0x80131500
  Message=unexpected token 'exc_info'
  Source=IronPython
  StackTrace:
   at IronPython.Runtime.ThrowingErrorSink.Add(SourceUnit sourceUnit, String message, SourceSpan span, Int32 errorCode, Severity severity)
   at IronPython.Compiler.Parser.ReportSyntaxError(Int32 start, Int32 end, String message, Int32 errorCode)
   at IronPython.Compiler.Parser.ReportSyntaxError(Token t, IndexSpan span, Int32 errorCode, Boolean allowIncomplete)
   at IronPython.Compiler.Parser.ParseVarArgsList(TokenKind terminator)
   at IronPython.Compiler.Parser.ParseFuncDef()
   at IronPython.Compiler.Parser.ParseSuite()
   at IronPython.Compiler.Parser.ParseClassOrFuncBody()
   at IronPython.Compiler.Parser.ParseClassDef()
   at IronPython.Compiler.Parser.ParseFileWorker(Boolean makeModule, Boolean returnValue)
   at IronPython.Compiler.Parser.ParseFile(Boolean makeModule, Boolean returnValue)
   at IronPython.Runtime.PythonContext.ParseAndBindAst(CompilerContext context)
   at IronPython.Runtime.PythonContext.CompilePythonCode(SourceUnit sourceUnit, CompilerOptions options, ErrorSink errorSink)
   at IronPython.Runtime.PythonContext.CompileModule(String fileName, String moduleName, SourceUnit sourceCode, ModuleOptions options, ScriptCode& scriptCode)
   at IronPython.Runtime.Importer.LoadModuleFromSource(CodeContext context, String name, String path)
   at IronPython.Runtime.Importer.LoadFromDisk(CodeContext context, String name, String fullName, String str)
   at IronPython.Runtime.Importer.ImportFromPathHook(CodeContext context, String name, String fullName, List path, Func`5 defaultLoader)
   at IronPython.Runtime.Importer.ImportFromPath(CodeContext context, String name, String fullName, List path)
   at IronPython.Runtime.Importer.ImportTopAbsolute(CodeContext context, String name)
   at IronPython.Runtime.Importer.ImportModule(CodeContext context, Object globals, String modName, Boolean bottom, Int32 level)
   at IronPython.Modules.Builtin.__import__(CodeContext context, String name, Object globals, Object locals, Object fromlist, Int32 level)
   at Microsoft.Scripting.Interpreter.FuncCallInstruction`7.Run(InterpretedFrame frame)
   at Microsoft.Scripting.Interpreter.Interpreter.Run(InterpretedFrame frame)
   at Microsoft.Scripting.Interpreter.LightLambda.Run7[T0,T1,T2,T3,T4,T5,T6,TRet](T0 arg0, T1 arg1, T2 arg2, T3 arg3, T4 arg4, T5 arg5, T6 arg6)
   at IronPython.Runtime.Importer.ImportLightThrow(CodeContext context, String fullName, PythonTuple from, Int32 level)
   at Microsoft.Scripting.Interpreter.FuncCallInstruction`4.Run(InterpretedFrame frame)
   at Microsoft.Scripting.Interpreter.Interpreter.Run(InterpretedFrame frame)
   at Microsoft.Scripting.Interpreter.LightLambda.Run1[T0,TRet](T0 arg0)
   at IronPython.Compiler.RuntimeScriptCode.InvokeTarget(Scope scope)
   at IronPython.Runtime.PythonContext.InitializeModule(String fileName, ModuleContext moduleContext, ScriptCode scriptCode, ModuleOptions options)
   at IronPython.Runtime.Importer.LoadModuleFromSource(CodeContext context, String name, String path)
   at IronPython.Runtime.Importer.LoadFromDisk(CodeContext context, String name, String fullName, String str)
   at IronPython.Runtime.Importer.ImportFromPathHook(CodeContext context, String name, String fullName, List path, Func`5 defaultLoader)
   at IronPython.Runtime.Importer.ImportFromPath(CodeContext context, String name, String fullName, List path)
   at IronPython.Runtime.Importer.ImportModule(CodeContext context, Object globals, String modName, Boolean bottom, Int32 level)
   at IronPython.Modules.Builtin.__import__(CodeContext context, String name, Object globals, Object locals, Object fromlist, Int32 level)
   at Microsoft.Scripting.Interpreter.FuncCallInstruction`7.Run(InterpretedFrame frame)
   at Microsoft.Scripting.Interpreter.Interpreter.Run(InterpretedFrame frame)
   at Microsoft.Scripting.Interpreter.LightLambda.Run8[T0,T1,T2,T3,T4,T5,T6,T7,TRet](T0 arg0, T1 arg1, T2 arg2, T3 arg3, T4 arg4, T5 arg5, T6 arg6, T7 arg7)
   at IronPython.Runtime.Importer.ImportLightThrow(CodeContext context, String fullName, PythonTuple from, Int32 level)
   at Microsoft.Scripting.Interpreter.FuncCallInstruction`5.Run(InterpretedFrame frame)
   at Microsoft.Scripting.Interpreter.Interpreter.Run(InterpretedFrame frame)
   at Microsoft.Scripting.Interpreter.LightLambda.Run1[T0,TRet](T0 arg0)
   at IronPython.Compiler.RuntimeScriptCode.InvokeTarget(Scope scope)
   at IronPython.Runtime.PythonContext.InitializeModule(String fileName, ModuleContext moduleContext, ScriptCode scriptCode, ModuleOptions options)
   at IronPython.Runtime.Importer.LoadModuleFromSource(CodeContext context, String name, String path)
   at IronPython.Runtime.Importer.LoadFromDisk(CodeContext context, String name, String fullName, String str)
   at IronPython.Runtime.Importer.ImportFromPathHook(CodeContext context, String name, String fullName, List path, Func`5 defaultLoader)
   at IronPython.Runtime.Importer.ImportFromPath(CodeContext context, String name, String fullName, List path)
   at IronPython.Runtime.Importer.ImportModule(CodeContext context, Object globals, String modName, Boolean bottom, Int32 level)
   at IronPython.Modules.Builtin.__import__(CodeContext context, String name, Object globals, Object locals, Object fromlist, Int32 level)
   at Microsoft.Scripting.Interpreter.FuncCallInstruction`7.Run(InterpretedFrame frame)
   at Microsoft.Scripting.Interpreter.Interpreter.Run(InterpretedFrame frame)
   at Microsoft.Scripting.Interpreter.LightLambda.Run8[T0,T1,T2,T3,T4,T5,T6,T7,TRet](T0 arg0, T1 arg1, T2 arg2, T3 arg3, T4 arg4, T5 arg5, T6 arg6, T7 arg7)
   at System.Dynamic.UpdateDelegates.UpdateAndExecute7[T0,T1,T2,T3,T4,T5,T6,TRet](CallSite site, T0 arg0, T1 arg1, T2 arg2, T3 arg3, T4 arg4, T5 arg5, T6 arg6)
   at IronPython.Runtime.Importer.ImportLightThrow(CodeContext context, String fullName, PythonTuple from, Int32 level)
   at Microsoft.Scripting.Interpreter.FuncCallInstruction`5.Run(InterpretedFrame frame)
   at Microsoft.Scripting.Interpreter.Interpreter.Run(InterpretedFrame frame)
   at Microsoft.Scripting.Interpreter.LightLambda.Run1[T0,TRet](T0 arg0)
   at IronPython.Compiler.RuntimeScriptCode.InvokeTarget(Scope scope)
   at IronPython.Runtime.PythonContext.InitializeModule(String fileName, ModuleContext moduleContext, ScriptCode scriptCode, ModuleOptions options)
   at IronPython.Runtime.Importer.LoadModuleFromSource(CodeContext context, String name, String path)
   at IronPython.Runtime.Importer.LoadFromDisk(CodeContext context, String name, String fullName, String str)
   at IronPython.Runtime.Importer.ImportFromPathHook(CodeContext context, String name, String fullName, List path, Func`5 defaultLoader)
   at IronPython.Runtime.Importer.ImportFromPath(CodeContext context, String name, String fullName, List path)
   at IronPython.Runtime.Importer.ImportTopAbsolute(CodeContext context, String name)
   at IronPython.Runtime.Importer.ImportModule(CodeContext context, Object globals, String modName, Boolean bottom, Int32 level)
   at IronPython.Modules.Builtin.__import__(CodeContext context, String name, Object globals, Object locals, Object fromlist, Int32 level)
   at Microsoft.Scripting.Interpreter.FuncCallInstruction`7.Run(InterpretedFrame frame)
   at Microsoft.Scripting.Interpreter.Interpreter.Run(InterpretedFrame frame)
   at Microsoft.Scripting.Interpreter.LightLambda.Run7[T0,T1,T2,T3,T4,T5,T6,TRet](T0 arg0, T1 arg1, T2 arg2, T3 arg3, T4 arg4, T5 arg5, T6 arg6)
   at IronPython.Runtime.Importer.ImportLightThrow(CodeContext context, String fullName, PythonTuple from, Int32 level)
   at Microsoft.Scripting.Interpreter.FuncCallInstruction`5.Run(InterpretedFrame frame)
   at Microsoft.Scripting.Interpreter.Interpreter.Run(InterpretedFrame frame)
   at Microsoft.Scripting.Interpreter.LightLambda.Run2[T0,T1,TRet](T0 arg0, T1 arg1)
   at IronPython.Compiler.PythonScriptCode.RunWorker(CodeContext ctx)
   at Microsoft.Scripting.Hosting.ScriptSource.Execute(ScriptScope scope)
   at WindowsFormsAppJTTH.Form1.button1_Click(Object sender, EventArgs e) in C:\Users\JamesTan\source\repos\WindowsFormsAppJTTH\WindowsFormsAppJTTH\Form1.cs:line 170
   at System.Windows.Forms.Control.OnClick(EventArgs e)
   at System.Windows.Forms.Button.OnClick(EventArgs e)
   at System.Windows.Forms.Button.OnMouseUp(MouseEventArgs mevent)
   at System.Windows.Forms.Control.WmMouseUp(Message& m, MouseButtons button, Int32 clicks)
   at System.Windows.Forms.Control.WndProc(Message& m)
   at System.Windows.Forms.ButtonBase.WndProc(Message& m)
   at System.Windows.Forms.Button.WndProc(Message& m)
   at System.Windows.Forms.NativeWindow.DebuggableCallback(IntPtr hWnd, Int32 msg, IntPtr wparam, IntPtr lparam)
   at System.Windows.Forms.UnsafeNativeMethods.DispatchMessageW(MSG& msg)
   at System.Windows.Forms.Application.ComponentManager.System.Windows.Forms.UnsafeNativeMethods.IMsoComponentManager.FPushMessageLoop(IntPtr dwComponentID, Int32 reason, Int32 pvLoopData)
   at System.Windows.Forms.Application.ThreadContext.RunMessageLoopInner(Int32 reason, ApplicationContext context)
   at System.Windows.Forms.Application.ThreadContext.RunMessageLoop(Int32 reason, ApplicationContext context)
   at WindowsFormsAppJTTH.Program.Main() in C:\Users\JamesTan\source\repos\WindowsFormsAppJTTH\WindowsFormsAppJTTH\Program.cs:line 19
STREETKILLER007 commented 6 years ago

I had emailed iron python developers about this error.

According to http://visbrain.org Visbrain is open source python 3 package.

According to the developer of iron python, they only support Python 2 and are working on Python 3 support.

So, Visbrain can't run under iron python 2.7.8.