conda command commands crash

[Johnnyboycurtis]

The conda commands such as conda install <package> crash in Terminus cmd.exe terminal but not in a regular Windows 10 cmd.exe terminal. Thus, I do not think this is a conda issue, but one with Terminus interacting with the conda.bat script. Any ideas of what may be causing this problem?

See the following results from Terminus when I execute the command conda install sqlparse

Microsoft Windows [Version 10.0.18362.356]
(c) 2019 Microsoft Corporation. All rights reserved.

C:\Users\jnavarrete>conda activate test

(test) C:\Users\jnavarrete>conda install sqlparse
Collecting package metadata (current_repodata.json): done
Solving environment: done

## Package Plan ##

  environment location: C:\Users\jnavarrete\AppData\Local\Continuum\miniconda3\envs\test

  added / updated specs:
    - sqlparse

The following NEW packages will be INSTALLED:

  sqlparse           pkgs/main/noarch::sqlparse-0.3.0-py_0

Proceed ([y]/n)? y

Preparing transaction: done
Verifying transaction: failed

# >>>>>>>>>>>>>>>>>>>>>> ERROR REPORT <<<<<<<<<<<<<<<<<<<<<<

    Traceback (most recent call last):
      File "C:\Users\jnavarrete\AppData\Local\Continuum\miniconda3\lib\site-packages\conda\exceptions.py", line 1074, in __call__
        return func(*args, **kwargs)
      File "C:\Users\jnavarrete\AppData\Local\Continuum\miniconda3\lib\site-packages\conda\cli\main.py", line 84, in _main
        exit_code = do_call(args, p)
      File "C:\Users\jnavarrete\AppData\Local\Continuum\miniconda3\lib\site-packages\conda\cli\conda_argparse.py", line 82, in do_call
        exit_code = getattr(module, func_name)(args, parser)
      File "C:\Users\jnavarrete\AppData\Local\Continuum\miniconda3\lib\site-packages\conda\cli\main_install.py", line 20, in execute
        install(args, parser, 'install')
      File "C:\Users\jnavarrete\AppData\Local\Continuum\miniconda3\lib\site-packages\conda\cli\install.py", line 317, in install
        handle_txn(unlink_link_transaction, prefix, args, newenv)
      File "C:\Users\jnavarrete\AppData\Local\Continuum\miniconda3\lib\site-packages\conda\cli\install.py", line 346, in handle_txn
        unlink_link_transaction.execute()
      File "C:\Users\jnavarrete\AppData\Local\Continuum\miniconda3\lib\site-packages\conda\core\link.py", line 244, in execute
        self.verify()
      File "C:\Users\jnavarrete\AppData\Local\Continuum\miniconda3\lib\site-packages\conda\common\io.py", line 88, in decorated
        return f(*args, **kwds)
      File "C:\Users\jnavarrete\AppData\Local\Continuum\miniconda3\lib\site-packages\conda\core\link.py", line 231, in verify
        exceptions = self._verify(self.prefix_setups, self.prefix_action_groups)
      File "C:\Users\jnavarrete\AppData\Local\Continuum\miniconda3\lib\site-packages\conda\core\link.py", line 591, in _verify
        itervalues(prefix_action_groups)):
      File "C:\Users\jnavarrete\AppData\Local\Continuum\miniconda3\lib\site-packages\conda\common\io.py", line 525, in map
        yield func(thing)
      File "C:\Users\jnavarrete\AppData\Local\Continuum\miniconda3\lib\site-packages\conda\core\link.py", line 411, in _verify_individual_level
        error_result = axn.verify()
      File "C:\Users\jnavarrete\AppData\Local\Continuum\miniconda3\lib\site-packages\conda\core\path_actions.py", line 959, in verify
        touch(user_environments_txt_file, mkdir=True, sudo_safe=True)
      File "C:\Users\jnavarrete\AppData\Local\Continuum\miniconda3\lib\site-packages\conda\gateways\disk\update.py", line 107, in touch
        mkdir_p_sudo_safe(dirpath)
      File "C:\Users\jnavarrete\AppData\Local\Continuum\miniconda3\lib\site-packages\conda\gateways\disk\__init__.py", line 82, in mkdir_p_sudo_safe
        mkdir_p_sudo_safe(base_dir)
      File "C:\Users\jnavarrete\AppData\Local\Continuum\miniconda3\lib\site-packages\conda\gateways\disk\__init__.py", line 82, in mkdir_p_sudo_safe
        mkdir_p_sudo_safe(base_dir)
      File "C:\Users\jnavarrete\AppData\Local\Continuum\miniconda3\lib\site-packages\conda\gateways\disk\__init__.py", line 82, in mkdir_p_sudo_safe
        mkdir_p_sudo_safe(base_dir)
      [Previous line repeated 975 more times]
      File "C:\Users\jnavarrete\AppData\Local\Continuum\miniconda3\lib\site-packages\conda\gateways\disk\__init__.py", line 80, in mkdir_p_sudo_safe
        base_dir = dirname(path)
      File "C:\Users\jnavarrete\AppData\Local\Continuum\miniconda3\lib\ntpath.py", line 221, in dirname
        return split(p)[0]
      File "C:\Users\jnavarrete\AppData\Local\Continuum\miniconda3\lib\ntpath.py", line 184, in split
        seps = _get_bothseps(p)
      File "C:\Users\jnavarrete\AppData\Local\Continuum\miniconda3\lib\ntpath.py", line 35, in _get_bothseps
        if isinstance(path, bytes):
    RecursionError: maximum recursion depth exceeded while calling a Python object

`$ C:\Users\jnavarrete\AppData\Local\Continuum\miniconda3\Scripts\conda-script.py install sqlparse`

  environment variables:
                 CIO_TEST=<not set>
                CONDA_BAT=C:\Users\jnavarrete\AppData\Local\Continuum\miniconda3\condabin\conda.
                          bat
        CONDA_DEFAULT_ENV=test
                CONDA_EXE=C:\Users\jnavarrete\AppData\Local\Continuum\miniconda3\condabin\..\Scr
                          ipts\conda.exe
               CONDA_EXES="C:\Users\jnavarrete\AppData\Local\Continuum\miniconda3\condabin\..\Sc
                          ripts\conda.exe"
             CONDA_PREFIX=C:\Users\jnavarrete\AppData\Local\Continuum\miniconda3\envs\test
    CONDA_PROMPT_MODIFIER=(test)
         CONDA_PYTHON_EXE=C:\Users\jnavarrete\AppData\Local\Continuum\miniconda3\python.exe
               CONDA_ROOT=C:\Users\jnavarrete\AppData\Local\Continuum\miniconda3
              CONDA_SHLVL=1
                 HOMEPATH=\
                     PATH=C:\Users\jnavarrete\AppData\Local\Continuum\miniconda3;C:\Users\jnavar
                          rete\AppData\Local\Continuum\miniconda3\Library\mingw-w64\bin;C:\Users
                          \jnavarrete\AppData\Local\Continuum\miniconda3\Library\usr\bin;C:\User
                          s\jnavarrete\AppData\Local\Continuum\miniconda3\Library\bin;C:\Users\j
                          navarrete\AppData\Local\Continuum\miniconda3\Scripts;C:\Users\jnavarre
                          te\AppData\Local\Continuum\miniconda3\bin;C:\Users\jnavarrete\AppData\
                          Local\Continuum\miniconda3\envs\test;C:\Users\jnavarrete\AppData\Local
                          \Continuum\miniconda3\envs\test\Library\mingw-w64\bin;C:\Users\jnavarr
                          ete\AppData\Local\Continuum\miniconda3\envs\test\Library\usr\bin;C:\Us
                          ers\jnavarrete\AppData\Local\Continuum\miniconda3\envs\test\Library\bi
                          n;C:\Users\jnavarrete\AppData\Local\Continuum\miniconda3\envs\test\Scr
                          ipts;C:\Users\jnavarrete\AppData\Local\Continuum\miniconda3\envs\test\
                          bin;C:\Users\jnavarrete\AppData\Local\Continuum\miniconda3\condabin;C:
                          \Program Files (x86)\Intel\Intel(R) Management Engine
                          Components\iCLS;C:\Program Files\Intel\Intel(R) Management Engine Comp
                          onents\iCLS;C:\Windows\system32;C:\Windows;C:\Windows\System32\Wbem;C:
                          \Windows\System32\WindowsPowerShell\v1.0;C:\Windows\System32\OpenSSH;C
                          :\Program Files\Git\cmd;C:\Program Files\Git\mingw64\bin;C:\Program Fi
                          les\Git\usr\bin;C:\Users\jnavarrete\AppData\Local\Continuum\miniconda3
                          ;C:\Users\jnavarrete\AppData\Local\Continuum\miniconda3\Library\mingw-
                          w64\bin;C:\Users\jnavarrete\AppData\Local\Continuum\miniconda3\Library
                          \usr\bin;C:\Users\jnavarrete\AppData\Local\Continuum\miniconda3\Librar
                          y\bin;C:\Users\jnavarrete\AppData\Local\Continuum\miniconda3\Scripts;C
                          :\Users\jnavarrete\AppData\Local\Microsoft\WindowsApps;C:\Users\jnavar
                          rete\AppData\Local\hyper\app-3.0.2\resources\bin;C:\Users\jnavarrete\A
                          ppData\Local\Programs\Microsoft VS Code\bin;C:\Program
                          Files\JetBrains\DataGrip 2019.2.2\bin;.;
             PSMODULEPATH=C:\Program Files\WindowsPowerShell\Modules;C:\Windows\system32\Windows
                          PowerShell\v1.0\Modules
       REQUESTS_CA_BUNDLE=<not set>
            SSL_CERT_FILE=<not set>
    VBOX_MSI_INSTALL_PATH=C:\Program Files\Oracle\VirtualBox\

     active environment : test
    active env location : C:\Users\jnavarrete\AppData\Local\Continuum\miniconda3\envs\test
            shell level : 1
       user config file : X:\.condarc
 populated config files :
          conda version : 4.7.12
    conda-build version : not installed
         python version : 3.7.4.final.0
       virtual packages :
       base environment : C:\Users\jnavarrete\AppData\Local\Continuum\miniconda3  (writable)
           channel URLs : https://repo.anaconda.com/pkgs/main/win-64
                          https://repo.anaconda.com/pkgs/main/noarch
                          https://repo.anaconda.com/pkgs/r/win-64
                          https://repo.anaconda.com/pkgs/r/noarch
                          https://repo.anaconda.com/pkgs/msys2/win-64
                          https://repo.anaconda.com/pkgs/msys2/noarch
          package cache : C:\Users\jnavarrete\AppData\Local\Continuum\miniconda3\pkgs
                          X:\.conda\pkgs
                          C:\Users\jnavarrete\AppData\Local\conda\conda\pkgs
       envs directories : C:\Users\jnavarrete\AppData\Local\Continuum\miniconda3\envs
                          X:\.conda\envs
                          C:\Users\jnavarrete\AppData\Local\conda\conda\envs
               platform : win-64
             user-agent : conda/4.7.12 requests/2.22.0 CPython/3.7.4 Windows/10 Windows/10.0.18362
          administrator : False
             netrc file : None
           offline mode : False

An unexpected error has occurred. Conda has prepared the above report.

If submitted, this report will be used by core maintainers to improve
future releases of conda.
Would you like conda to send this report to the core maintainers?

[y/N]: y
Upload successful.

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by running

    $ conda config --set report_errors true

Under a regular cmd.exe terminal, things works out fine. See the following results

(test) C:\Users\jnavarrete\Documents>conda install sqlparse
Collecting package metadata (current_repodata.json): done
Solving environment: done

## Package Plan ##

  environment location: C:\Users\jnavarrete\AppData\Local\Continuum\miniconda3\envs\test

  added / updated specs:
    - sqlparse

The following NEW packages will be INSTALLED:

  sqlparse           pkgs/main/noarch::sqlparse-0.3.0-py_0

Proceed ([y]/n)? y

Preparing transaction: done
Verifying transaction: done
Executing transaction: done

[Johnnyboycurtis]

I think I found a fix to this. The issue results from my cmd.exe default setting to open at a network drive location (X:\).

Setting a path under Settings --> Shell --> Working directory (C:\Users\jnavarrete) does not seem to provide a fix for Anaconda even though it does allow a new terminal to open under the new specified path.

My solution was actually pretty simple. I created a custom Profile (Settings --> Shell --> Saved Profiles) using the Anaconda Prompt settings. I looked at the properties of the Anaconda Prompt (which comes shipped with conda) and copied the Target argument.

I pasted the following to the custom profile in Terminus /k C:\Users\jnavarrete\AppData\Local\Continuum\miniconda3\Scripts\activate.bat

The only remaining issue is that the title of each tab seems to change to the command arguments added to the custom profile.

I think this solution should be documented somewhere for other Python developers to reference.

[stale[bot]]

This issue has been automatically marked as stale because it has not had recent activity. It will be closed in two weeks unless you comment. Thank you for your contributions.