User specific Nextflow workdir on HPC

Euro-BioImaging / BatchConvert

A nextflow based tool that wraps bfconvert and bioformats2raw to convert image data collections to OME-TIFF and OME-Zarr, respectively, in a parallelised manner.

MIT License

16 stars 2 forks source link

User specific Nextflow workdir on HPC #15

Open tischi opened 9 months ago

tischi commented 9 months ago

Proposal:

/scratch/$USER/.batchconvert