A nextflow based tool that wraps bfconvert and bioformats2raw to convert image data collections to OME-TIFF and OME-Zarr, respectively, in a parallelised manner.
Currently configuration has to be done interactively. A configuration option to parse the default parameters from user-specified configuration files should be added.
Currently configuration has to be done interactively. A configuration option to parse the default parameters from user-specified configuration files should be added.