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EvolBioInf / fur

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Method of choosing index target representative #9

Open ethan-mcq opened 1 year ago

ethan-mcq commented 1 year ago

Is there a method of choosing the index target representative for the macle index when running makeFurDb?

haubold commented 1 year ago

The -r switch in makeFurDb takes as argument the name of the file containing the target representative. Without -r, makeFurDb uses the longest target as representative. Does that help?