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Evolinc / Evolinc-I

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Using merged from gffcompare on DE #19

Closed luciaq21 closed 4 years ago

luciaq21 commented 4 years ago

I tried running Evolinc-I on a cluster with Singularity and I have run into a number of issues, so I am opting to run it on the DE instead. I have the following question, my merged gtf is from gffcompare and not cuffcompare (since this program is now outdated and gffcompare is basically its newer version). Previously I had been told this was fine, but to use the -r flag. I was wondering what I can do when running it on the DE. Is there an option for this?

andrew-d-l-nelson commented 4 years ago

Hi luciaq21, shoot me an email (andrew.d.l.nelson at gmail.com) and I will walk you through the process. We can get your issues resolved!