ExploreASL / ExploreASL

ExploreASL: releases can be found in the main branch or within the releases tab. If you want to contribute, please contact us at h.j.mutsaerts@amsterdamumc.nl. Development details can be found under the wiki tab. Code documentation can be found on the documentation website https://exploreasl.github.io/Documentation
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Subject-wise mask and atlas printing error #1712

Open MDijsselhof opened 3 weeks ago

MDijsselhof commented 3 weeks ago

Description

The boolean x.S.SubjectWiseVisualizations can be enabled to print the final ROIs/masks per subject (after all atlas & subject-wise masks have been combined, e.g., deep WM + vascular mask + FoV mask + pvWM), in the map /Population/Stats/CheckMasksVisually.

There was a bug that needed fixing, and not all masks were shown. Note that some of the changes below will be changed more later, if we remove some of the im2column.

Tasks

How to test

Can be tested on flux: lood_storage/divi/Projects/ExploreASL/insight46/derivatives/ExploreASL/

Release notes

Required: summarize the changes for the release notes here