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ExposuresProvider / icees-api-config

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updated FHIR mapping to capture all predefined code/system pairs #83

Closed hyi closed 2 years ago

hyi commented 2 years ago

@karafecho I updated the code to take in updated FHIR mapping input file and generate output file to capture all predefined code/system pairs. I checked the updated FHIR mapping output file and everything appears to look correct to me. Please take a look and see if the FHIR mapping output pcd file looks good to you paying special attention to those few variables with predefined system/code. After this PR is approved, I'll merge it and run FHIR PIT again for PCD patient data.

hyi commented 2 years ago

@karafecho Yeah, I had to remove duplicates from the Athena search results which results in the order changes. I randomly checked results and it appears the mappings themselves did not change despite order changes. I am merging the PR and will rerun FHIR PIT on PCD data with updated FHIR mappings.

karafecho commented 2 years ago

I randomly checked the mappings, too. I think we're fine.