ICEES KG p_value returned as "empty / no value!" when very small

[karafecho]

This issue is to report that ICEES KG sometimes returns a p_value of empty / no value!, presumably when the P value is very small. An example is provided below for Prednisone.

Query:

{
  "nodes": {
    "n0": {
      "ids": [
        "MONDO:0004979"
      ],
      "categories": [
        "biolink:Disease"
      ],
      "is_set": false,
      "constraints": []
    },
    "n1": {
      "categories": [
        "biolink:ChemicalEntity"
      ],
      "is_set": false,
      "constraints": []
    }
  },
  "edges": {
    "e0": {
      "subject": "n0",
      "object": "n1",
      "predicates": [
        "biolink:has_real_world_evidence_of_association_with"
      ],
      "attribute_constraints": [],
      "qualifier_constraints": []
    }
  }
}

**Prednisone answer - edge attributes:**

PUBCHEM.COMPOUND:5865----biolink:has_real_world_evidence_of_association_with----MONDO:0004979
id: urn:uuid:1cf29205-8d60-4cf1-9daf-1ec253f83a90
  -- attribute_type_id: | biolink:Attribute value_type_id: | EDAM:data_0006 original_attribute_name: | chi_squared value: | 5108.055269966048   attribute_type_id: | biolink:aggregator_knowledge_source value_type_id: | biolink:InformationResource original_attribute_name: | biolink:aggregator_knowledge_source attribute_source: | infores:automat-icees-kg value: | infores:automat-icees-kg   attribute_type_id: | biolink:Attribute value_type_id: | EDAM:data_0006 original_attribute_name: | icees_cohort_identifier value: | Asthma_UNC_PEGS_patient_2015_v4_binned_deidentified\|asthma\|2015\|2022_08_03_11_31_06   attribute_type_id: | biolink:Attribute value_type_id: | EDAM:data_0006 original_attribute_name: | total value: | 157920   attribute_type_id: | biolink:p_value value_type_id: | EDAM:data_0006 original_attribute_name: | p_value value: | -- empty / no value! --   attribute_type_id: | biolink:Attribute value_type_id: | EDAM:data_0006 original_attribute_name: | object_feature_name value: | ReactiveAirwayDx   attribute_type_id: | biolink:primary_knowledge_source value_type_id: | biolink:InformationResource original_attribute_name: | biolink:primary_knowledge_source attribute_source: | infores:automat-icees-kg value: | infores:icees-kg   attribute_type_id: | biolink:Attribute value_type_id: | EDAM:data_0006 original_attribute_name: | terms_and_conditions_of_use value: | https://github.com/NCATSTranslator/Translator-All/wiki/ICEES--and-ICEES-KG-Terms-and-Conditions-of-Use   attribute_type_id: | biolink:Attribute value_type_id: | EDAM:data_0006 original_attribute_name: | subject_feature_name value: | PrednisoneRx   attribute_type_id: | biolink:supporting_data_source value_type_id: | EDAM:data_0006 original_attribute_name: | biolink:supporting_data_source value: | https://github.com/NCATSTranslator/Translator-All/wiki/Exposures-Provider-ICEES [PUBCHEM.COMPOUND:5865](javascript:lookup_synonym('PUBCHEM.COMPOUND:5865',true))----biolink:has_real_world_evidence_of_association_with----[MONDO:0004979](javascript:lookup_synonym('MONDO:0004979',true)) id: urn:uuid:1cf29205-8d60-4cf1-9daf-1ec253f83a90 attribute_type_id: biolink:Attribute value_type_id: EDAM:data_0006 original_attribute_name: chi_squared value: 5108.055269966048 attribute_type_id: biolink:aggregator_knowledge_source value_type_id: biolink:InformationResource original_attribute_name: biolink:aggregator_knowledge_source attribute_source: infores:automat-icees-kg value: infores:automat-icees-kg attribute_type_id: biolink:Attribute value_type_id: EDAM:data_0006 original_attribute_name: icees_cohort_identifier value: Asthma_UNC_PEGS_patient_2015_v4_binned_deidentified|asthma|2015|2022_08_03_11_31_06 attribute_type_id: biolink:Attribute value_type_id: EDAM:data_0006 original_attribute_name: total value: 157920 attribute_type_id: biolink:p_value value_type_id: EDAM:data_0006 original_attribute_name: p_value value: -- empty / no value! -- attribute_type_id: biolink:Attribute value_type_id: EDAM:data_0006 original_attribute_name: object_feature_name value: ReactiveAirwayDx attribute_type_id: biolink:primary_knowledge_source value_type_id: biolink:InformationResource original_attribute_name: biolink:primary_knowledge_source attribute_source: infores:automat-icees-kg value: infores:icees-kg attribute_type_id: biolink:Attribute value_type_id: EDAM:data_0006 original_attribute_name: terms_and_conditions_of_use value: https://github.com/NCATSTranslator/Translator-All/wiki/ICEES--and-ICEES-KG-Terms-and-Conditions-of-Use attribute_type_id: biolink:Attribute value_type_id: EDAM:data_0006 original_attribute_name: subject_feature_name value: PrednisoneRx attribute_type_id: biolink:supporting_data_source value_type_id: EDAM:data_0006 original_attribute_name: biolink:supporting_data_source value: https://github.com/NCATSTranslator/Translator-All/wiki/Exposures-Provider-ICEES ```

[maximusunc]

Was this fixed with the latest updated PCD csv files?

[karafecho]

Yes, we can close this issue.