ExpressionAnalysis / STAR-SEQR

RNA Fusion Detection and Quantification
Other
16 stars 12 forks source link

IntervalTree error: version compatibility #26

Open kskuchin opened 3 years ago

kskuchin commented 3 years ago

If anyone comes across this error:

"AttributeError: 'IntervalTree' object has no attribute 'search'"

try downgrading your version of intervaltree to version 2.1.0. Intervaltree version 3 was released in late 2018, and the 'search' function used here is no longer supported.