issues
search
ExpressionAnalysis
/
STAR-SEQR
RNA Fusion Detection and Quantification
Other
16
stars
12
forks
source link
Dev0.3.0
#7
Closed
jasper1918
closed
7 years ago
jasper1918
commented
7 years ago
STAR-SEQRv0.3.0:
Big release!
Better modularity in code
Speed improvements for all annotation functions
Improved logging
Fixed a bug in bed subsetting when using the "both" style
No longer produces the same style of bedpe/VCF for Fusions.
New Fusion bedpe using proper coordinates
Support fastqs are broken into more coherent groupings: span, split, overhang
Cross homology checks now use span and overhang reads separately
Fixed a primer bug where breakpoints were not being used correctly in some cases
Fixed several bugs that were introduced that prevented DNA mode from working.
STAR-SEQRv0.3.0: