Find and retrieve one (51766.CEL) or several microarray data files based on (in house) identifiers.”
Note: other transcriptomics platforms are possible such as single cell sequencing, expression sequencing, genome sequencing, all types of imaging etc. This case does not yet involve any analysis and no visualization.
Functional Question: Retrieve 51766.CEL or several microarray data files. Or sequencing or other. Or microarrays from GEO
It can be hard because: I may not have access. Please make FAIR recommendations.
Requirements:
This is about finding and accessing data files. A good system is needed to store and find data files based on location and identifiers; the system also needs to allow users to download and upload files. Registration of the files needs to happen at data upload. The same system must be used for all types of data files: comprehensive searches without a good system are hard when, for example, microarray files are stored in-house, sequencing files are stored in Amazon S3 buckets, and image files are stored externally. The system must allow searches for and retrieval of single or multiple data files.
Owner: Jean Marc Neefs
Find and retrieve one (51766.CEL) or several microarray data files based on (in house) identifiers.” Note: other transcriptomics platforms are possible such as single cell sequencing, expression sequencing, genome sequencing, all types of imaging etc. This case does not yet involve any analysis and no visualization. Functional Question: Retrieve 51766.CEL or several microarray data files. Or sequencing or other. Or microarrays from GEO It can be hard because: I may not have access. Please make FAIR recommendations. Requirements: This is about finding and accessing data files. A good system is needed to store and find data files based on location and identifiers; the system also needs to allow users to download and upload files. Registration of the files needs to happen at data upload. The same system must be used for all types of data files: comprehensive searches without a good system are hard when, for example, microarray files are stored in-house, sequencing files are stored in Amazon S3 buckets, and image files are stored externally. The system must allow searches for and retrieval of single or multiple data files. Owner: Jean Marc Neefs