External data and internal data.
Finding the associated datasets/assays/location/accession(e.g. ArrayExpress/ENA) ->
Data ingest (libraries getting data from GEO) ->
A sample sheet (immunology, transcriptomics)
Check whether the terms are in the vocabularies
Push to databases ()
FuqiX
commented
3 years ago
https://docs.google.com/document/d/1TMMcNiS7_oM9P3FZ0WNYp0aUOjokI3cbRkKeeB9Y_iI/edit
External data and internal data. Finding the associated datasets/assays/location/accession(e.g. ArrayExpress/ENA) -> Data ingest (libraries getting data from GEO) -> A sample sheet (immunology, transcriptomics) Check whether the terms are in the vocabularies Push to databases ()