new recipe request, how to perform ontology annotation using zooma and ols

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new recipe request, how to perform ontology annotation using zooma and ols #121

Open FuqiX opened 4 years ago

FuqiX commented 4 years ago

This recipe shows how to perform automatized ontology annotation with ZOOMA and OLS. It explains what is ontology annotation, annotation tools available and a zooma annotation demo.

[ ] write recipe
[ ] assign reviewer
[ ] review
[ ] convert to markdown
[ ] publish

Recipe (WIP) here

FuqiX commented 4 years ago

To answer this question from EBiSC

Zooma is not used for automatic ontology annotation, we use the web interface of zooma to allow user to select ontology annotation based on a free text entry

therefore we have wrong/inconsistent annotations

example: for 'fibroblast', we have 4 different ontology entries (BTO, CL, FMA, NCIT)

we have a list of prefered ontologies, but all of these ontologies are on list