allysonlister
commented
4 years ago As with the related issue in SRAO (https://github.com/FAIRsharing/subject-ontology/issues/53), I'll look at these after the COVID terms - but please carry on adding! Thanks :)
Definition: “The extraction and recovery of usable or valuable material from scrap or other discarded materials. (from McGraw-Hill Dictionary of Scientific and Technical Terms, 6th ed.)” [MESH] https://bioportal.bioontology.org/ontologies/MESH?p=classes&conceptid=http%3A%2F%2Fpurl.bioontology.org%2Fontology%2FMESH%2FD059027 Related record: National Pollutant Release Inventory, https://fairsharing.org/biodbcore-001476/ Where in the hierarchy: part_of “processed material” Comments: Not sure at all this is the perfect place in the hierarchy. Already defined in “User-defined Tags”
Definition: “” Related record: National Pollutant Release Inventory, https://fairsharing.org/biodbcore-001476/ Where in the hierarchy:
Definition: “In satellite laser ranging (SLR) a global network of observation stations that measures the round trip time of flight of ultrashort pulses of light to satellites equipped with retroreflectors. This provides instantaneous range measurements of millimeter level precision which can be accumulated to provide accurate measurement of orbits and a host of important scientific data.” [WIKIPEDIA] Related record: EUROLAS Data Center, https://fairsharing.org/biodbcore-001482/ Where in the hierarchy: part_of “measurement” or “measurement device” Comments: I didn’t find this term in another ontology. Also more infos here : https://ilrs.gsfc.nasa.gov/. Already defined in “User-defined Tags”
Definition: “A riometer (commonly relative ionospheric opacity meter, although originally: Relative Ionospheric Opacity Meter for Extra-Terrestrial Emissions of Radio noise[1]) is an instrument used to quantify the amount of electromagnetic-wave ionospheric absorption in the atmosphere.” [WIKIPEDIA] https://en.wikipedia.org/wiki/Riometer Related record: World Data Centre for Space Weather, https://fairsharing.org/biodbcore-001477/ Where in the hierarchy: part_of “measurement” or “measurement device”
Definition: “A magnetometer is a device that measures magnetism—the direction, strength, or relative change of a magnetic field at a particular location.” [WIKIPEDIA] https://en.wikipedia.org/wiki/Magnetometer Related record: World Data Centre for Space Weather, https://fairsharing.org/biodbcore-001477/ Where in the hierarchy: part_of “measurement” or “measurement device”
Definition: “An optical spectrometer (spectrophotometer, spectrograph or spectroscope) is an instrument used to measure properties of light over a specific portion of the electromagnetic spectrum, typically used in spectroscopic analysis to identify materials.” [WIKIPEDIA] https://en.wikipedia.org/wiki/Optical_spectrometer Related record: World Data Centre for Space Weather, https://fairsharing.org/biodbcore-001477/ Where in the hierarchy: part_of “measurement” or “measurement device”
Definition: “Any type of variation in the appearance of energy output of the sun.” [NASA Thesaurus, 1994] https://bioportal.bioontology.org/ontologies/MESH?p=classes&conceptid=http%3A%2F%2Fpurl.bioontology.org%2Fontology%2FMESH%2FD019445 Related record: World Data Centre for Space Weather, https://fairsharing.org/biodbcore-001477/ Where in the hierarchy: ?
Definition: “An aerosol (abbreviation of "aero-solution") is a suspension of fine solid particles or liquid droplets in air or another gas.[1] Aerosols can be natural or anthropogenic.” [WIKIPEDIA] https://en.wikipedia.org/wiki/Aerosol Related record: GAWSIS, https://fairsharing.org/biodbcore-001478/ Where in the hierarchy: part_of “molecular entity”
Definition: “Ozone in the troposphere. It is considered a secondary air pollutant because it is produced by the reaction of solar ULTRAVIOLET RAYS with other AIR POLLUTANTS and because of its harmful effects on the respiratory system and the environment.” [MESH] https://bioportal.bioontology.org/ontologies/MESH?p=classes&conceptid=http%3A%2F%2Fpurl.bioontology.org%2Fontology%2FMESH%2FD010126 Related record: GAWSIS, https://fairsharing.org/biodbcore-001478/ Where in the hierarchy: part_of “environmental feature”
Definition: “Gaseous elements, chemicals that are in the atmosphere that may contribute to GREENHOUSE EFFECT.“ [MESH] https://bioportal.bioontology.org/ontologies/MESH?p=classes&conceptid=http%3A%2F%2Fpurl.bioontology.org%2Fontology%2FMESH%2FD000074382 Related record: GAWSIS, https://fairsharing.org/biodbcore-001478/ Where in the hierarchy: part_of “environmental feature”, “molecular entity”, “small molecule” ? Maybe create something like “gas” and “greenhouse gases” should be part-of.
Definition: “That portion of the electromagnetic spectrum immediately below the visible range and extending into the x-ray frequencies. The longer wavelengths (near-UV or biotic or vital rays) are necessary for the endogenous synthesis of vitamin D and are also called antirachitic rays; the shorter, ionizing wavelengths (far-UV or abiotic or extravital rays) are viricidal, bactericidal, mutagenic, and carcinogenic and are used as disinfectants.“ [MESH] https://bioportal.bioontology.org/ontologies/MESH?p=classes&conceptid=http%3A%2F%2Fpurl.bioontology.org%2Fontology%2FMESH%2FD000074382 Related record: GAWSIS, https://fairsharing.org/biodbcore-001478/ Where in the hierarchy: part_of “radiation”
Definition: “Fuel oil (also known as heavy oil, marine fuel or furnace oil) is a fraction obtained from petroleum distillation, either as a distillate or a residue. In general terms, fuel oil is any liquid fuel that is burned in a furnace or boiler for the generation of heat or used in an engine for the generation of power, except oils having a flash point of approximately 42 °C (108 °F) and oils burned in cotton or wool-wick burners.“ [WIKIPEDIA] https://en.wikipedia.org/wiki/Fuel_oil Related record: Alternative Fuels Data Center, https://fairsharing.org/biodbcore-001480/ Where in the hierarchy: part_of “material transformation process” ? should create “fuel” term to be part of it
Definition: “A fossil fuel is a fuel formed by natural processes, such as anaerobic decomposition of buried dead organisms, containing organic molecules originating in ancient photosynthesis[1] that release energy in combustion.“ [WIKIPEDIA] https://en.wikipedia.org/wiki/Fossil_fuel Related record: Alternative Fuels Data Center, https://fairsharing.org/biodbcore-001480/ Where in the hierarchy: part_of “material transformation process” ? ? should create “fuel” term to be part of it
I don’t know if it is usefull to go into details with : Biodiesel Electricity Ethanol Hydrogen Natural Gas Propane Emerging Fuels
Definition: “The prediction or projection of the nature of future problems or existing conditions based upon the extrapolation or interpretation of existing scientific data or by the application of scientific methodology.“ [MESH] https://bioportal.bioontology.org/ontologies/MESH?p=classes&conceptid=http%3A%2F%2Fpurl.bioontology.org%2Fontology%2FMESH%2FD005544 Related record: GHRC, https://fairsharing.org/biodbcore-001490/ Where in the hierarchy: part_of “environmental system process” ? Or in SRAO “part_of” Meteorology
Definition: “The state of the atmosphere at a given time and place, with respect to variables such as temperature, moisture, wind velocity, and barometric pressure.” [NCIT] https://bioportal.bioontology.org/ontologies/NCIT?p=classes&conceptid=http%3A%2F%2Fncicb.nci.nih.gov%2Fxml%2Fowl%2FEVS%2FThesaurus.owl%23C170964 Related record: GHRC, https://fairsharing.org/biodbcore-001490/ Where in the hierarchy: part_of “environmental feature” ? Or in SRAO “part_of” Meteorology
Definition: “An abrupt high-current electric discharge that occurs in the ATMOSPHERE and that has a path length ranging from hundreds of feet to tens of miles. (From McGraw-Hill Dictionary of Scientific and Technical Terms, 6th ed)” [MESH] https://bioportal.bioontology.org/ontologies/MESH?p=classes&conceptid=http%3A%2F%2Fpurl.bioontology.org%2Fontology%2FMESH%2FD008030 Related record: GHRC, https://fairsharing.org/biodbcore-001490/ Where in the hierarchy: part_of “environmental feature” or “environmental system process” ?
Definition: “Pacific tropical cyclones north of the Equator west of the International Dateline. These have winds over 74 mph.” [MESH] https://bioportal.bioontology.org/ontologies/MESH?p=classes&conceptid=http%3A%2F%2Fpurl.bioontology.org%2Fontology%2FMESH%2FD055867 Related record: GHRC, https://fairsharing.org/biodbcore-001490/ Where in the hierarchy: part_of “storm” ?
Definition: “A storm is an environmental process in which an environmental system and the processes it participates in are strongly perturbed by external forcings. These forcings typically increase the rates of processes unfolding in the system, relative to their normal rates.” [Environment Ontology] https://bioportal.bioontology.org/ontologies/ENVO?p=classes&conceptid=http%3A%2F%2Fpurl.obolibrary.org%2Fobo%2FENVO_01000876 Related record: GHRC, https://fairsharing.org/biodbcore-001490/ Where in the hierarchy: part_of “environmental feature” or “environmental system process” ?
satellite data ?
“Temperature”
Definition: “Temperature is a physical property of matter that quantitatively expresses hot and cold. It is the manifestation of thermal energy, present in all matter, which is the source of the occurrence of heat, a flow of energy, when a body is in contact with another that is colder.” [WIKIPEDIA] https://en.wikipedia.org/wiki/Temperature Related record: OceanDataPortal, https://fairsharing.org/biodbcore-001498/ Where in the hierarchy: part_of “environmental feature” or “environmental condition” ?
Definition: “Degree of saltiness, which is largely the OSMOLAR CONCENTRATION of SODIUM CHLORIDE plus any other SALTS present. It is an ecological factor of considerable importance, influencing the types of organisms that live in an ENVIRONMENT.” Related record: OceanDataPortal, https://fairsharing.org/biodbcore-001498/ Where in the hierarchy: part_of “environmental feature” or “environmental condition” ?
Definition: “Wind is the flow of gases on a large scale. On the surface of the Earth, wind consists of the bulk movement of air. In outer space, solar wind is the movement of gases or charged particles from the Sun through space, while planetary wind is the outgassing of light chemical elements from a planet's atmosphere into space.” [WIKIPEDIA] https://en.wikipedia.org/wiki/Wind Related record: Western Regional Climate Center, https://fairsharing.org/biodbcore-001499/ Where in the hierarchy: part_of “environmental feature” or “environmental condition” ?
Definition: “Tides are the rise and fall of sea levels caused by the combined effects of the gravitational forces exerted by the Moon and the Sun, and the rotation of the Earth.” [WIKIPEDIA] https://en.wikipedia.org/wiki/Tide Related record: Center for Operational Oceanographic Products and Services, https://fairsharing.org/biodbcore-001502/ Where in the hierarchy: part_of “environmental feature” or “environmental condition” ?
Definition: “The social institution involving legal and/or religious sanction whereby men and women are joined together for the purpose of founding a family unit; the state of being a married couple.” [NCIT] https://bioportal.bioontology.org/ontologies/NCIT?p=classes&conceptid=http%3A%2F%2Fncicb.nci.nih.gov%2Fxml%2Fowl%2FEVS%2FThesaurus.owl%23C48033 Related record: https://fairsharing.org/biodbcore-001539/ Where in the hierarchy: somewhere in the planned process, should create a child like “social”
-“Employment“
Definition: “The state of being engaged in an activity or service for wages or salary; the occupation for which you are paid.” [NCIT] https://bioportal.bioontology.org/ontologies/NCIT?p=classes&conceptid=http%3A%2F%2Fncicb.nci.nih.gov%2Fxml%2Fowl%2FEVS%2FThesaurus.owl%23C25172 Related record: https://fairsharing.org/biodbcore-001539/ Where in the hierarchy: somewhere in the planned process, should create a child like “social”
Definition: “A gain or recurrent benefit during a period of time, usually measured in money that derives from capital or labor.” [NCIT] https://bioportal.bioontology.org/ontologies/NCIT?p=classes&conceptid=http%3A%2F%2Fncicb.nci.nih.gov%2Fxml%2Fowl%2FEVS%2FThesaurus.owl%23C41150 Related record: https://fairsharing.org/biodbcore-001539/ Where in the hierarchy: somewhere in the planned process, should create a child like “social”
Definition: “An indicator as to whether the female subject has the potential to become pregnant.” [NCIT] https://bioportal.bioontology.org/ontologies/NCIT?p=classes&conceptid=http%3A%2F%2Fncicb.nci.nih.gov%2Fxml%2Fowl%2FEVS%2FThesaurus.owl%23C106508 Related record: https://fairsharing.org/biodbcore-001539/ Where in the hierarchy: somewhere in the planned process, should create a child like “social”
Definition: “The lowest of the concentric layers of the atmosphere, occurring between the Earth's surface and the tropopause. It is the zone where atmospheric turbulence is at its greatest and where the bulk of the Earth's weather is generated. It contains almost all the water vapour and aerosols and three-quarters of the total gaseous mass of the atmosphere. Throughout the troposphere temperature decreases with height at a mean rate of 6.5°C/km and the whole zone is capped by either an inversion of temperature or an isothermal layer at the tropopause. (Source: WHIT) Definition from GEMET - will be refined.” [Environment Ontology] https://bioportal.bioontology.org/ontologies/ENVO?p=classes&conceptid=http%3A%2F%2Fpurl.obolibrary.org%2Fobo%2FENVO_01000540 Related record: https://fairsharing.org/biodbcore-001540/ Where in the hierarchy: part_of “environmental feature” or “environmental system process” ?
Definition: “A magnetosphere is a region of space surrounding an astronomical object in which charged particles are affected by that object's magnetic field.[1][2] It is created by a star or planet with an active interior dynamo.” [Wikipedia] https://en.wikipedia.org/wiki/Magnetosphere Related record: https://fairsharing.org/biodbcore-001555/ Where in the hierarchy: part_of “environmental feature” or “environmental system process” ?
“Solar wind” Definition: “The solar wind is a stream of charged particles released from the upper atmosphere of the Sun, called the corona.” [WIKIPEDIA] https://en.wikipedia.org/wiki/Solar_wind Related record: https://fairsharing.org/biodbcore-001555/ Where in the hierarchy: ?
“Cryosphere” Definition: “The cryosphere (from the Greek κρύος kryos, "cold", "frost" or "ice" and σφαῖρα sphaira, "globe, ball"[1]) is an all-encompassing term for those portions of Earth's surface where water is in solid form, including sea ice, lake ice, river ice, snow cover, glaciers, ice caps, ice sheets, and frozen ground (which includes permafrost).” [WIKIPEDIA] https://en.wikipedia.org/wiki/Cryosphere Related record: https://fairsharing.org/biodbcore-001558/ Where in the hierarchy: ?
“Glacier” Definition: “A glacier is a persistent body of dense ice that is constantly moving under its own weight.” [WIKIPEDIA] https://en.wikipedia.org/wiki/Glacier Related record: https://fairsharing.org/biodbcore-001558/ Where in the hierarchy: ?
“Sea ice” Definition: “Sea ice arises as seawater freezes. Because ice is less dense than water, it floats on the ocean's surface (as does fresh water ice, which has an even lower density).” [WIKIPEDIA] https://en.wikipedia.org/wiki/Sea_ice Related record: https://fairsharing.org/biodbcore-001558/ Where in the hierarchy: ?
“Plankton” Definition: “Plankton are the diverse collection of organisms that live in large bodies of water and are unable to swim against a current.” [WIKIPEDIA] https://en.wikipedia.org/wiki/Plankton Related record: https://fairsharing.org/biodbcore-001584/ Where in the hierarchy: ?
“Volcano” Definition: “An opening, or rupture, in the Earth's surface or crust, which allows hot, molten rock, ash and gases to escape from deep below the surface.” [Environment Ontology] https://bioportal.bioontology.org/ontologies/ENVO?p=classes&conceptid=http%3A%2F%2Fpurl.obolibrary.org%2Fobo%2FENVO_00000247 Related record: https://fairsharing.org/biodbcore-001571/ Where in the hierarchy: ?
“Magma” Definition: “Magma is a mixture of molten or semi-molten rock, volatiles, and solids that is found beneath the uppermost solid layer of a planetary body. Besides molten rock, magma may also contain suspended crystals, dissolved gas and sometimes gas bubbles.” [Environment Ontology] https://bioportal.bioontology.org/ontologies/ENVO?p=classes&conceptid=http%3A%2F%2Fpurl.obolibrary.org%2Fobo%2FENVO_01000648 Related record: https://fairsharing.org/biodbcore-001586/ Where in the hierarchy: ?
“Pressure” Definition: “Pressure is the force applied perpendicular to the surface of an object per unit area over which that force is distributed.” [Wikipedia] https://en.wikipedia.org/wiki/Pressure Related record: https://fairsharing.org/biodbcore-001586/ Where in the hierarchy: ?
“Sanitation” Definition: “The development and establishment of environmental conditions favorable to the health of the public. ” [MESH] https://bioportal.bioontology.org/ontologies/MESH?p=classes&conceptid=http%3A%2F%2Fpurl.bioontology.org%2Fontology%2FMESH%2FD012499 Related record: https://fairsharing.org/biodbcore-001589/ Where in the hierarchy: ?
“Zooplankton” Definition: “Zooplankton are heterotrophic (sometimes detritivorous) plankton.” [Wikipedia] https://en.wikipedia.org/wiki/Zooplankton Related record: https://fairsharing.org/biodbcore-001590/ IRI: http://purl.obolibrary.org/obo/OMIT_0015869 Where in the hierarchy: Plankton
“Coast” Definition: “Zooplankton are heterotrophic (sometimes detritivorous) plankton.” [ENVO] https://www.ebi.ac.uk/ols/ontologies/envo/terms?iri=http%3A%2F%2Fpurl.obolibrary.org%2Fobo%2FENVO_01000687&viewMode=All&siblings=false Related record: https://fairsharing.org/biodbcore-001590/ IRI: http://purl.obolibrary.org/obo/ENVO_01000687 Where in the hierarchy: ?
“Carbon” Definition: “A nonmetalic tetravalent element with symbol C, atomic number 6, and atomic weight 12. [ ]” [NCIT] Related record: https://fairsharing.org/biodbcore-001592/ IRI: http://purl.obolibrary.org/obo/NCIT_C63798 http://purl.obolibrary.org/obo/OMIT_0003581 Where in the hierarchy: ?