Closed shnizzedy closed 11 months ago
The nature of the original CCS pipeline (stop and check/choose masks) doesn't fully jive with C-PAC's automated "industrial scale", so we do need to reassess the CCS options at some point based on intended use/strategy. But this is good for now!
Fixes
Fixes
for
by @nx10 & @e-kenneally on Slack
Description
Updates the BOLD resource coming out of the
bold_mask_ccs
NodeBlock to be interchangeable with the BOLD resource coming out of thebold_mask_fsl_afni
NodeBlock. (The BOLD resource coming out ofbold_mask_ccs
is not being used elsewhere as far as I can tell)Technical details
func_masking.using
https://github.com/FCP-INDI/C-PAC/blob/1d195412665cacceb575cf8dd3b0eeb812dbd326/CPAC/pipeline/schema.py#L834-L836, before this PR, onlyFSL_AFNI
was compatible withcoregistration_prep_fmriprep
, and after 1d195412665cacceb575cf8dd3b0eeb812dbd326 onlyFSL_AFNI
andCCS_Anatomical_Refined
are. I imagine we should make the others compatible as well?develop
Checklist
Update index.md
).fix/smoke-1.8.6-dev
branch of the repository.Developer Certificate of Origin
Developer Certificate of Origin
``` Developer Certificate of Origin Version 1.1 Copyright (C) 2004, 2006 The Linux Foundation and its contributors. 1 Letterman Drive Suite D4700 San Francisco, CA, 94129 Everyone is permitted to copy and distribute verbatim copies of this license document, but changing it is not allowed. Developer's Certificate of Origin 1.1 By making a contribution to this project, I certify that: (a) The contribution was created in whole or in part by me and I have the right to submit it under the open source license indicated in the file; or (b) The contribution is based upon previous work that, to the best of my knowledge, is covered under an appropriate open source license and I have the right under that license to submit that work with modifications, whether created in whole or in part by me, under the same open source license (unless I am permitted to submit under a different license), as indicated in the file; or (c) The contribution was provided directly to me by some other person who certified (a), (b) or (c) and I have not modified it. (d) I understand and agree that this project and the contribution are public and that a record of the contribution (including all personal information I submit with it, including my sign-off) is maintained indefinitely and may be redistributed consistent with this project or the open source license(s) involved. ```