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FCP-INDI / C-PAC

Configurable Pipeline for the Analysis of Connectomes
https://fcp-indi.github.io/
GNU Lesser General Public License v3.0
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Redundant addition of motion parameters in prep_group_analysis_workflow? #262

Open czarrar opened 10 years ago

czarrar commented 10 years ago

Within the function prep_group_analysis_workflow in cpac_group_analysis_pipeline.py, if scrubbing is turned on then various motion parameters are added to the phenotypic file. This seems redundant and maybe should be removed.

maartenmennes commented 10 years ago

I might be totally of topic, but the fact that you're scrubbing should not mean that you do not want to regress for motion in the remaining volumes?

On Mon, Oct 7, 2013 at 8:08 PM, Zarrar Shehzad notifications@github.comwrote:

Within the function prep_group_analysis_workflow in cpac_group_analysis_pipeline.py, if scrubbing is turned on then various motion parameters are added to the phenotypic file. This seems redundant and maybe should be removed.

— Reply to this email directly or view it on GitHubhttps://github.com/FCP-INDI/C-PAC/issues/262 .

Maarten Mennes, Ph.D. Post-Doctoral Researcher Donders Institute for Brain, Cognition and Behaviour Dept. of Cognitive Neuroscience Radboud University Nijmegen Medical Centre Nijmegen The Netherlands

Google Scholar Author Linkhttp://scholar.google.com/citations?user=pLlSTVgAAAAJ&hl=en