Error of subject workflow cpac_sub-30021s_ses-1
CPAC run error:
Pipeline configuration: sleep-0.2Scrubbing
Subject workflow: cpac_sub-30021s_ses-1
Elapsed run time (minutes): 6.418776273727417
Timing information saved in /outputs/log/cpac_individual_timing_sleep-0.2Scrubbing.csv
System time of start: 2021-09-15 17:38:42
Traceback (most recent call last):
File "/code/CPAC/pipeline/cpac_pipeline.py", line 450, in run_workflow
workflow.run(plugin=plugin, plugin_args=plugin_args)
File "/usr/local/miniconda/lib/python3.7/site-packages/nipype/pipeline/engine/workflows.py", line 632, in run
runner.run(execgraph, updatehash=updatehash, config=self.config)
File "/usr/local/miniconda/lib/python3.7/site-packages/nipype/pipeline/plugins/base.py", line 192, in run
report_nodes_not_run(notrun)
File "/usr/local/miniconda/lib/python3.7/site-packages/nipype/pipeline/plugins/tools.py", line 98, in report_nodes_not_run
("Workflow did not execute cleanly. " "Check log for details")
RuntimeError: Workflow did not execute cleanly. Check log for details
Description
A rerun of a single participant with existing working directory and outputs:
working:
output:
Version
1.8.0
Container
fcpindi/c-pac:latest
System
server (lisa): Debian 11 (bullseye)
Data Size
No response
Results
crash-20210915-173944-UID1014-check_for_s3-7c73ec6b-cc5e-41d1-ba25-2e4d06e0ea22.txt
Run Command:
Pipeline Config
cpac_pipeline_config_2021-09-15T17-36-57Z.yml
Data Config
cpac_data_config_2021-09-15T17-36-57Z.yml
Default Pipeline Diff
cpac_pipeline_config_2021-09-15T17-36-57Z_min.yml
Screenshots of brain extraction and registration wireframe overlays from QC pages
No response
Node timing information
No response
Extracted time series 1D and nuisance regressors 1D correlations against previous version or some benchmark
No response