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FINNGEN / ETL

second version for the ETL of the detailed longitudinal data to the OMOP-CDM
https://finngen.github.io/ETL/
MIT License
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add qc_input_data.sql checks there are not FINNGENIDS with the same INDEX #152

Closed javier-gracia-tabuenca-tuni closed 1 year ago

javier-gracia-tabuenca-tuni commented 1 year ago

following this conversation : https://finngencommunity.slack.com/archives/C023M6TJHKK/p1692022503388959

something like

service sector data > count(finngenid, source, index)> filter(n!=1) > nrow() == 0

javier-gracia-tabuenca-tuni commented 1 year ago

not urgent, but lets have it it for DF12